RPL4: ribosomal protein L4
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain LC
4v6x chain CC
5a8l chain H
5aj0 chain AC
5lks chain LC
5t2c chain F
6ip5 chain 1F
6ip6 chain 1F
6ip8 chain 1F
6lqm chain D
6lsr chain D
6lss chain D
6lu8 chain D
6ole chain C
6olf chain C
6olg chain AC
6oli chain C
6olz chain AC
6om0 chain C
6om7 chain C
6qzp chain LC
6w6l chain C
6xa1 chain LC
6y0g chain LC
6y2l chain LC
6y57 chain LC
6y6x chain LC
6z6l chain LC
6z6m chain LC
6z6n chain LC
6zm7 chain LC
6zme chain LC
6zmi chain LC
6zmo chain LC
7bhp chain LC
7f5s chain LC
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S55 NRQPYAVS ELAGHQT 1 19 - - - - - - - - 12 7 - - - - - - - - - - S290 KMINTDLS RILKSPE 1 6 6 - - - - - - - - - - - - - - - - - - - S295 DLSRILKS PEIQRAL 8 798 113 - - - 97 100 - - 17 8 88 78 89 82 63 14 26 11 12 - S365 AAALQAKS DEKAAVA 1 25 25 - - - - - - - - - - - - - - - - - - -
Tumor and normal comparison
Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S55 NRQPYAVS ELAGHQT - - - - - - - - - - - S290 KMINTDLS RILKSPE - - - - - - - - - - - S295 DLSRILKS PEIQRAL 1e-48 - - 4.9e-30 - - 2.5e-27 1.3e-10 1.4e-6 -0.5 - S365 AAALQAKS DEKAAVA - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
Loading, please wait
all sites
S55
S290
S295
S365
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S55 S290 S295 S365 protein RNA SCNV methylation CCRCC S55 S290 S295 S365 protein RNA SCNV methylation COAD S55 S290 S295 S365 protein RNA SCNV methylation GBM S55 S290 S295 S365 protein RNA SCNV methylation HNSCC S55 S290 S295 S365 protein RNA SCNV methylation LSCC S55 S290 S295 S365 protein RNA SCNV methylation LUAD S55 S290 S295 S365 protein RNA SCNV methylation OV S55 S290 S295 S365 protein RNA SCNV methylation PDAC S55 S290 S295 S365 protein RNA SCNV methylation UCEC S55 S290 S295 S365 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S55
S290
S295
S365
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S55
S290
S295
S365
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.