Protein: ENSP00000312081
Gene: SSH3

LinkedOmicsKB © 2022-2023 Zhang Lab

SSH3:
slingshot protein phosphatase 3

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S9ALVTVSRSPPGSGAS7974--6143--98-1025989809788--102429518
S13VSRSPPGSGASTPVG4169--1412------1083129----5312
T17PPGSGASTPVGPWDQ5395--3330----251369634946----607
S37SRLQRRQSFAVLRGA71124--10380--99-1086210899110101--99429518
S61NDDAAEASSEPTEKA353--------631514------69
S62DDAAEASSEPTEKAP258----------54------463
S70EPTEKAPSEEELHGD592------9-545554----3916
T79EELHGDQTDFGQGSQ335--44----63108--------
S85QTDFGQGSQSPQKQE6498--4636----482883756964--271111-
S87DFGQGSQSPQKQEEQ6422------99-25131093128--74328318
Showing 1 to 10 of 23 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S9ALVTVSRSPPGSGAS-3e-11--0.026---4.8e-18-5e-10-7.2e-4-0.10.01
S13VSRSPPGSGASTPVG-2.3e-3-------1.8e-6--0.64
T17PPGSGASTPVGPWDQ-0.034-0.39---0.88-2.1e-5-0.49---
S37SRLQRRQSFAVLRGA7.1e-17-4e-8---0.029-0.273.9e-25-1.6e-130.62
S61NDDAAEASSEPTEKA-----------
S62DDAAEASSEPTEKAP-----------
S70EPTEKAPSEEELHGD0.016---------0.016
T79EELHGDQTDFGQGSQ-----------
S85QTDFGQGSQSPQKQE0.086-0.01---3.5e-30.0140.61-0.22-
S87DFGQGSQSPQKQEEQ0.051-----0.1-0.35-3.9e-9-0.2
Showing 1 to 10 of 23 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationCCRCCS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationCOADS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationGBMS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationHNSCCS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationLSCCS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationLUADS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationOVS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationPDACS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylationUCECS9S13T17S37S61S62S70T79S85S87T247S259S473S484S494T495S540S542S602S636T638S649S653proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.