- USP20:
- ubiquitin specific peptidase 20
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S103 | LAAPLLGSSSKFSEQ | 6 | 340 | 66 | - | - | - | 16 | 11 | - | - | 30 | 15 | 54 | 50 | - | - | - | - | 40 | 20 | 25 | 13 |
S112 | SKFSEQDSPPPSHPL | 9 | 703 | 57 | - | 80 | 67 | - | - | 62 | - | 69 | 40 | 15 | 14 | 85 | 77 | 42 | 9 | 44 | 23 | 17 | 2 |
S132 | AVADEGESESEDDDL | 10 | 1367 | 105 | - | 99 | 76 | 87 | 84 | 98 | - | 108 | 62 | 83 | 76 | 100 | 93 | 70 | 15 | 94 | 39 | 62 | 16 |
S134 | ADEGESESEDDDLKP | 9 | 945 | 9 | - | 63 | 56 | 65 | 78 | 99 | - | 101 | 59 | 84 | 77 | 89 | 82 | - | - | 52 | 23 | 5 | 3 |
S263 | ALTEARDSDSSDTDE | 9 | 184 | 8 | - | 12 | 11 | - | - | 28 | - | 16 | 11 | 5 | 4 | 4 | 4 | 19 | 7 | 11 | 5 | 39 | - |
S265 | TEARDSDSSDTDEKR | 8 | 455 | 88 | - | 86 | 65 | - | - | 9 | - | 7 | 3 | 39 | 34 | 50 | 45 | - | - | 13 | 5 | 11 | - |
S266 | EARDSDSSDTDEKRE | 8 | 514 | 88 | - | 98 | 76 | - | - | 36 | - | 6 | 4 | 5 | 5 | 54 | 49 | - | - | 27 | 11 | 39 | 16 |
S277 | EKREGDRSPSEDEFL | 3 | 23 | 6 | - | - | - | - | - | - | - | - | - | 4 | 4 | - | - | 8 | 1 | - | - | - | - |
S285 | PSEDEFLSCDSSSDR | 1 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 6 | 2 |
S288 | DEFLSCDSSSDRGEG | 2 | 15 | - | - | 3 | 3 | - | - | - | - | 6 | 3 | - | - | - | - | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S103 | LAAPLLGSSSKFSEQ | -0.68 | - | - | - | - | 3.5e-3 | 1.7e-8 | - | - | -4.6e-11 | -0.25 |
S112 | SKFSEQDSPPPSHPL | -0.18 | - | 6.7e-3 | - | - | -7.8e-4 | - | -0.78 | - | -0.082 | - |
S132 | AVADEGESESEDDDL | -1.4e-7 | - | -8.8e-16 | 0.96 | - | -1.9e-8 | 0.029 | 2.8e-4 | 0.32 | -4.7e-8 | -8.9e-3 |
S134 | ADEGESESEDDDLKP | -0.89 | - | -0.2 | 1.4e-3 | - | -2.5e-3 | 1.9e-3 | 0.014 | - | -1.4e-6 | - |
S263 | ALTEARDSDSSDTDE | - | - | - | - | - | - | - | - | - | - | - |
S265 | TEARDSDSSDTDEKR | -0.019 | - | -2.2e-17 | - | - | - | -1 | 1.0e-5 | - | - | - |
S266 | EARDSDSSDTDEKRE | -1.3e-5 | - | -5e-19 | - | - | - | - | 2.0e-6 | - | -0.9 | -9.0e-6 |
S277 | EKREGDRSPSEDEFL | - | - | - | - | - | - | - | - | - | - | - |
S285 | PSEDEFLSCDSSSDR | - | - | - | - | - | - | - | - | - | - | - |
S288 | DEFLSCDSSSDRGEG | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |