- APBA3:
- amyloid beta precursor protein binding family A member 3
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S9 | DFPTISRSPSGPPAM | 5 | 99 | - | - | 4 | 4 | 4 | 5 | - | - | - | - | - | - | 9 | 8 | 48 | 11 | - | - | 6 | - |
S11 | PTISRSPSGPPAMDL | 10 | 902 | 98 | - | 51 | 39 | 70 | 73 | 73 | - | 11 | 7 | 69 | 64 | 67 | 61 | 56 | 13 | 48 | 19 | 71 | 12 |
T32 | LVPSEDLTPDSQWDP | 8 | 153 | 15 | - | 22 | 18 | 4 | 5 | 9 | - | 24 | 12 | - | - | 4 | 4 | - | - | 9 | 3 | 17 | 7 |
S35 | SEDLTPDSQWDPMPG | 5 | 85 | 15 | - | 5 | 4 | - | - | - | - | 23 | 12 | 4 | 5 | 9 | 8 | - | - | - | - | - | - |
S46 | PMPGGPGSLSRMELD | 8 | 362 | - | - | - | - | 48 | 46 | 27 | - | 24 | 13 | 25 | 22 | 17 | 16 | 7 | 2 | 50 | 23 | 36 | 6 |
S149 | PEDPDEDSDSPEWVE | 1 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 7 | 2 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S9 | DFPTISRSPSGPPAM | -1.5e-3 | - | - | - | - | - | - | - | -1.5e-3 | - | - |
S11 | PTISRSPSGPPAMDL | 0.004 | - | 1.5e-10 | 1.1e-4 | - | - | 4.6e-8 | -0.21 | -0.3 | -5.3e-3 | -2.4e-3 |
T32 | LVPSEDLTPDSQWDP | -0.079 | - | 0.25 | - | - | -2.8e-4 | - | - | - | - | - |
S35 | SEDLTPDSQWDPMPG | -7.3e-3 | - | - | - | - | -7.3e-3 | - | - | - | - | - |
S46 | PMPGGPGSLSRMELD | -0.1 | - | - | -0.28 | - | -0.03 | -0.09 | - | - | 0.091 | - |
S149 | PEDPDEDSDSPEWVE | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |