TYMS: thymidylate synthetase
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1hvy chain A
1hvy chain B
1hvy chain C
1hvy chain D
1hw3 chain A
1hw4 chain A
1hzw chain A
1hzw chain B
1i00 chain A
1i00 chain B
1ju6 chain A
1ju6 chain B
1ju6 chain C
1ju6 chain D
1juj chain A
1juj chain B
1juj chain C
1juj chain D
1ypv chain A
2onb chain A
2rd8 chain A
2rd8 chain B
2rda chain A
2rda chain B
2rda chain C
2rda chain D
2rda chain E
2rda chain F
3eaw chain X
3ebu chain A
3ed7 chain A
3edw chain X
3ef9 chain A
3egy chain X
3ehi chain X
3ejl chain A
3ejl chain B
3ejl chain C
3ejl chain D
3gg5 chain A
3gg5 chain B
3gg5 chain C
3gg5 chain D
3gh0 chain A
3gh2 chain X
3h9k chain A
3h9k chain B
3h9k chain C
3h9k chain D
3h9k chain E
3hb8 chain A
3hb8 chain B
3hb8 chain C
3hb8 chain D
3hb8 chain E
3n5e chain A
3n5e chain B
3n5g chain A
3ob7 chain A
3ob7 chain B
3ob7 chain C
3ob7 chain D
3ob7 chain E
4e28 chain A
4fgt chain A
4g2o chain X
4g6w chain X
4gd7 chain A
4gyh chain A
4h1i chain A
4h1i chain B
4h1i chain C
4h1i chain D
4jef chain A
4kpw chain A
4o1u chain A
4o1u chain B
4o1x chain A
4o1x chain B
4o1x chain C
4o1x chain D
4up1 chain A
4up1 chain B
4up1 chain C
4up1 chain D
5hs3 chain A
5hs3 chain B
5hs3 chain C
5hs3 chain D
5hs3 chain E
5hs3 chain F
5wrn chain A
5wrn chain B
5wrn chain C
5wrn chain D
5wrn chain E
5wrn chain F
5x4w chain A
5x4x chain A
5x4y chain A
5x5a chain A
5x5a chain B
5x5a chain C
5x5a chain D
5x5a chain E
5x5a chain F
5x5d chain A
5x5d chain B
5x5d chain C
5x5d chain D
5x5d chain E
5x5d chain F
5x5q chain A
5x5q chain B
5x5q chain C
5x5q chain D
5x5q chain E
5x5q chain F
5x66 chain A
5x66 chain B
5x66 chain C
5x66 chain D
5x66 chain E
5x66 chain F
5x67 chain A
5x67 chain B
5x69 chain A
5x69 chain B
5x69 chain C
5x69 chain D
5x69 chain E
5x69 chain F
6oju chain A
6oju chain B
6oju chain C
6oju chain D
6ojv chain A
6ojv chain B
6ojv chain C
6ojv chain D
6pf3 chain A
6pf3 chain B
6pf3 chain C
6pf3 chain D
6pf4 chain A
6pf4 chain B
6pf4 chain C
6pf4 chain D
6pf5 chain A
6pf5 chain B
6pf5 chain C
6pf5 chain D
6pf6 chain A
6pf6 chain B
6pf6 chain C
6pf6 chain D
6qxg chain A
6qxg chain B
6qxg chain C
6qxh chain A
6qxh chain B
6qxh chain C
6qyq chain A
6qyq chain B
6qyq chain C
6qyq chain D
6r2e chain A
6r2e chain B
6r2e chain C
6r2e chain D
6r2e chain E
6r2e chain F
6r2e chain G
6r2e chain H
6zxo chain A
6zxo chain B
6zxo chain C
6zxo chain D
6zxo chain E
6zxo chain F
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S114 KIWDANGS RDFLDSL 5 253 14 - 8 8 - - - - 76 41 54 47 - - - - 3 2 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S114 KIWDANGS RDFLDSL 8.3e-17 - - - - 2.8e-4 4e-16 - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S114
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S114 protein RNA SCNV methylation CCRCC S114 protein RNA SCNV methylation COAD S114 protein RNA SCNV methylation GBM S114 protein RNA SCNV methylation HNSCC S114 protein RNA SCNV methylation LSCC S114 protein RNA SCNV methylation LUAD S114 protein RNA SCNV methylation OV S114 protein RNA SCNV methylation PDAC S114 protein RNA SCNV methylation UCEC S114 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S114
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S114
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.