- RMI1:
- RecQ mediated genome instability 1
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S219 | GEPDLVVSVIPNNSN | 2 | 34 | 26 | - | 4 | 4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S225 | VSVIPNNSNENIPRV | 3 | 48 | - | - | - | - | 4 | 5 | - | - | - | - | - | - | - | - | - | - | 3 | 2 | 23 | 11 |
S243 | LDPALGPSDEELLAS | 2 | 37 | 9 | - | - | - | - | - | - | - | 19 | 9 | - | - | - | - | - | - | - | - | - | - |
S265 | TANNDTSSERCFTTG | 1 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 8 | - |
S284 | TIPTRQSSFEPEFVI | 9 | 1025 | 105 | - | 78 | 57 | - | - | 99 | - | 73 | 44 | 83 | 77 | 65 | 60 | 70 | 15 | 72 | 31 | 78 | 18 |
S292 | FEPEFVISPRPKEEP | 9 | 683 | 96 | - | 19 | 19 | - | - | 46 | - | 80 | 45 | 68 | 64 | 56 | 54 | 36 | 7 | 8 | 4 | 66 | 15 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S219 | GEPDLVVSVIPNNSN | - | - | - | - | - | - | - | - | - | - | - |
S225 | VSVIPNNSNENIPRV | -5.6e-5 | - | - | - | - | - | - | - | - | - | -5.6e-5 |
S243 | LDPALGPSDEELLAS | - | - | - | - | - | - | - | - | - | - | - |
S265 | TANNDTSSERCFTTG | - | - | - | - | - | - | - | - | - | - | - |
S284 | TIPTRQSSFEPEFVI | 2.3e-11 | - | 9.7e-9 | - | - | 1.1e-3 | 2.4e-15 | 7.0e-6 | 0.63 | -0.035 | -0.036 |
S292 | FEPEFVISPRPKEEP | 1.9e-5 | - | - | - | - | 0.56 | 3.0e-6 | 4.4e-3 | - | - | 0.65 |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |