NCL:
nucleolin

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S28PKEVEEDSEDEEMSE1070898-44283263-50297356575412542186716
S34DSEDEEMSEDEEDDS1063344-87131337-975559482922518437659
S41SEDEEDDSSGEEVVI107837-3229282590-104581010110911459541313
S42EDEEDDSSGEEVVIP10464113-7781898-13610944715122284
S67SAKKVVVSPTKKVAV101553122-103809710099-10862108991101018319105449518
T76TKKVAVATPAKKAAV101348122-1212869399-1025910899105938319100439518
T84PAKKAAVTPGKKAAA101065102-1110151290-67371089610289761790388916
T92PGKKAAATPAKKTVT361------9-------206--26-
T99TPAKKTVTPAKAVTT525523---------353135325413239--
T105VTPAKAVTTPGKKGA19--------------72----
Showing 1 to 10 of 42 rows
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Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S28PKEVEEDSEDEEMSE6e-24--8.2e-3-7.5e-41.1e-143.4e-7-0.0833.3e-5
S34DSEDEEMSEDEEDDS1.8e-20----1.1e-51.1e-116.0e-4-8.5e-5-
S41SEDEEDDSSGEEVVI3.4e-14--0.0634.5e-3-3.2e-6-3.6e-16-1.6e-3-
S42EDEEDDSSGEEVVIP4.6e-8--8.5e-17------0.55-
S67SAKKVVVSPTKKVAV2.7e-122-1.5e-181.5e-29-2.4e-173.4e-359.8e-282.1e-91.4e-100.023
T76TKKVAVATPAKKAAV4.2e-74--7.1e-11-9.3e-115.6e-342.1e-211.8e-64.3e-72.2e-4
T84PAKKAAVTPGKKAAA4e-39----0.441.4e-323.1e-260.0142e-80.47
T92PGKKAAATPAKKTVT-----------
T99TPAKKTVTPAKAVTT2e-26-----3e-173.8e-102.0e-4--
T105VTPAKAVTTPGKKGA-----------
Showing 1 to 10 of 42 rows
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationCCRCCS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationCOADS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationGBMS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationHNSCCS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationLSCCS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationLUADS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationOVS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationPDACS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylationUCECS28S34S41S42S67T76T84T92T99T105T106T121S145S153S184S206T213T214S328S356T367T405S458S460S479T480S482S494S496T498T501S532S542S563S580T583T587S591S595T606S608S619proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.