NCAM1: neural cell adhesion molecule 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2e3v chain A
2e3v chain B
2e3v chain C
2haz chain A
2vkw chain A
2vkw chain B
2vkx chain A
2vkx chain B
2vkx chain C
2vkx chain D
2vkx chain E
2vkx chain F
3mtr chain A
3mtr chain B
5aea chain A
5aea chain B
5lkn chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S170 DVRFIVLS NNYLQIR 1 9 - - - - - - 9 - - - - - - - - - - - - - T186 IKKTDEGT YRCEGRI 1 9 - - - - - - 9 - - - - - - - - - - - - - T244 AEGFPEPT MSWTKDG 1 8 - - - - - - 8 - - - - - - - - - - - - - S246 GFPEPTMS WTKDGEQ 1 8 - - - - - - 8 - - - - - - - - - - - - - T248 PEPTMSWT KDGEQIE 1 8 - - - - - - 8 - - - - - - - - - - - - - S349 RTSTRNIS SEEKASW 1 36 - - - - - - 36 - - - - - - - - - - - - - S350 TSTRNISS EEKASWT 1 72 - - - - - - 72 - - - - - - - - - - - - - S355 ISSEEKAS WTRPEKQ 1 62 - - - - - - 62 - - - - - - - - - - - - - S480 YLEVTPDS ENDFGNY 1 18 - - - - - - 18 - - - - - - - - - - - - - Y487 SENDFGNY NCTAVNR 1 18 - - - - - - 18 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S170 DVRFIVLS NNYLQIR - - - - - - - - - - - T186 IKKTDEGT YRCEGRI - - - - - - - - - - - T244 AEGFPEPT MSWTKDG - - - - - - - - - - - S246 GFPEPTMS WTKDGEQ - - - - - - - - - - - T248 PEPTMSWT KDGEQIE - - - - - - - - - - - S349 RTSTRNIS SEEKASW - - - - - - - - - - - S350 TSTRNISS EEKASWT - - - - - - - - - - - S355 ISSEEKAS WTRPEKQ - - - - - - - - - - - S480 YLEVTPDS ENDFGNY - - - - - - - - - - - Y487 SENDFGNY NCTAVNR - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S170
T186
T244
S246
T248
S349
S350
S355
S480
Y487
T490
S557
S601
S653
S664
S780
S784
T793
T798
T813
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation CCRCC S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation COAD S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation GBM S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation HNSCC S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation LSCC S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation LUAD S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation OV S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation PDAC S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation UCEC S170 T186 T244 S246 T248 S349 S350 S355 S480 Y487 T490 S557 S601 S653 S664 S780 S784 T793 T798 T813 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S170
T186
T244
S246
T248
S349
S350
S355
S480
Y487
T490
S557
S601
S653
S664
S780
S784
T793
T798
T813
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S170
T186
T244
S246
T248
S349
S350
S355
S480
Y487
T490
S557
S601
S653
S664
S780
S784
T793
T798
T813
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.