ARID1A: AT-rich interaction domain 1A
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1ryu chain A
6lth chain L
6ltj chain L
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S79 ELQDGAES NGGGGGG 9 268 14 - 12 4 5 4 36 - 11 7 15 13 28 23 - - 35 13 42 6 S90 GGGGGAGS GGGPGAE 7 121 41 - 5 4 - - 18 - 16 11 5 5 4 4 7 1 - - - - T118 PALNNNLT EPPGGGG 1 10 - - - - - - - - 6 4 - - - - - - - - - - S128 PGGGGGGS SDGVGAP 1 10 - - - - - - - - 6 4 - - - - - - - - - - Y229 YPPPAPAY ALSSPRG 1 10 - - - - - - - - 6 4 - - - - - - - - - - S232 PAPAYALS SPRGGTP 1 9 - - - - - - - - 7 2 - - - - - - - - - - S233 APAYALSS PRGGTPG 10 904 99 - 44 35 5 4 36 - 102 59 48 45 69 63 55 13 93 38 87 9 S280 AMGGGGPS AAGGGTP 1 9 - - - - - - - - - - 5 4 - - - - - - - - T286 PSAAGGGT PQPTATP 6 325 - - 13 12 - - - - 21 15 44 41 57 51 - - 15 6 34 16 T290 GGGTPQPT ATPTLNQ 2 17 - - - - - - - - - - 5 4 - - - - - - 6 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S79 ELQDGAES NGGGGGG -0.084 - - - - - - -0.2 - -0.25 - S90 GGGGGAGS GGGPGAE - - - - - - - - - - - T118 PALNNNLT EPPGGGG - - - - - - - - - - - S128 PGGGGGGS SDGVGAP - - - - - - - - - - - Y229 YPPPAPAY ALSSPRG - - - - - - - - - - - S232 PAPAYALS SPRGGTP - - - - - - - - - - - S233 APAYALSS PRGGTPG -1.1e-9 - 0.1 - - -0.011 -0.85 -1.3e-7 -0.041 -9.2e-11 - S280 AMGGGGPS AAGGGTP - - - - - - - - - - - T286 PSAAGGGT PQPTATP -1.1e-7 - - - - -5.3e-3 -0.046 -9.7e-4 - - -0.011 T290 GGGTPQPT ATPTLNQ - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S79
S90
T118
S128
Y229
S232
S233
S280
T286
T290
S301
S357
S363
T377
S381
S382
S604
S607
S610
S613
S614
S617
S696
S698
S702
S715
S730
Y762
S764
S769
S772
S1182
S1184
S1195
S1204
T1206
Y1211
S1214
S1320
S1338
Y1339
S1513
S1544
S1547
T1599
S1600
S1602
S1604
S1751
S1754
S1755
S1798
T1888
T1891
T1921
S1929
S1944
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation CCRCC S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation COAD S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation GBM S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation HNSCC S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation LSCC S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation LUAD S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation OV S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation PDAC S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation UCEC S79 S90 T118 S128 Y229 S232 S233 S280 T286 T290 S301 S357 S363 T377 S381 S382 S604 S607 S610 S613 S614 S617 S696 S698 S702 S715 S730 Y762 S764 S769 S772 S1182 S1184 S1195 S1204 T1206 Y1211 S1214 S1320 S1338 Y1339 S1513 S1544 S1547 T1599 S1600 S1602 S1604 S1751 S1754 S1755 S1798 T1888 T1891 T1921 S1929 S1944 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S79
S90
T118
S128
Y229
S232
S233
S280
T286
T290
S301
S357
S363
T377
S381
S382
S604
S607
S610
S613
S614
S617
S696
S698
S702
S715
S730
Y762
S764
S769
S772
S1182
S1184
S1195
S1204
T1206
Y1211
S1214
S1320
S1338
Y1339
S1513
S1544
S1547
T1599
S1600
S1602
S1604
S1751
S1754
S1755
S1798
T1888
T1891
T1921
S1929
S1944
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S79
S90
T118
S128
Y229
S232
S233
S280
T286
T290
S301
S357
S363
T377
S381
S382
S604
S607
S610
S613
S614
S617
S696
S698
S702
S715
S730
Y762
S764
S769
S772
S1182
S1184
S1195
S1204
T1206
Y1211
S1214
S1320
S1338
Y1339
S1513
S1544
S1547
T1599
S1600
S1602
S1604
S1751
S1754
S1755
S1798
T1888
T1891
T1921
S1929
S1944
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.