Protein: ENSP00000320949
Gene: CNOT1

LinkedOmicsKB © 2022-2023 Zhang Lab

CNOT1:
CCR4-NOT transcription complex subunit 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S312TDGIPLQSISAPGSG19----------54--------
S318QSISAPGSGIWSDGK1049532-444580-3017494540376261243718
S626FLKRRCPSILGGLAP214--44--------------6-
S1008PPVKMQGSITTPGSI581------9-1265554----287
T1011KMQGSITTPGSIALA16------------------6-
T1058TVTVTRPTGVSFKKD18------8-------------
S1061VTRPTGVSFKKDVPP104539-1211242963-5230151413132156828424
S1481ASALRTASPQQREMM5283------91---29272321428--2913
S1703QDGRAYGSPWCNKQI55613-54--18---55------6-
T2186DLDSYLKTRSPVTFL115------------87------
Showing 1 to 10 of 11 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S312TDGIPLQSISAPGSG-----------
S318QSISAPGSGIWSDGK0.064----0.972.0e-52.2e-4--1.8e-3-0.46
S626FLKRRCPSILGGLAP-----------
S1008PPVKMQGSITTPGSI-----------
T1011KMQGSITTPGSIALA-----------
T1058TVTVTRPTGVSFKKD-----------
S1061VTRPTGVSFKKDVPP-0.17---0.004-4.9e-3----0.021-
S1481ASALRTASPQQREMM-0.012------0.042.1e-3---7.1e-8
S1703QDGRAYGSPWCNKQI-----------
T2186DLDSYLKTRSPVTFL-----------
Showing 1 to 10 of 11 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationCCRCCS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationCOADS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationGBMS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationHNSCCS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationLSCCS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationLUADS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationOVS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationPDACS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylationUCECS312S318S626S1008T1011T1058S1061S1481S1703T2186S2188proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.