PDLIM5:
PDZ and LIM domain 5

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S32NMPLTISSLKDGGKA5105--------37245444--83115
S52RIGDVVLSIDGINAQ110----------55--------
S76KIKGCTGSLNMTLQR118--------117----------
T80CTGSLNMTLQRASAA617347-54--9---3028----2611112
T110VVKPVPITSPAVSKV36023-1714--------------6-
S111VKPVPITSPAVSKVT10105449-5433939599-7041494545407015100439518
S119PAVSKVTSTNNMAYN94447---393354-34215512127176318918
T120AVSKVTSTNNMAYNK749573-9472----241144413029--49226-
S134KAPRPFGSVSSPKVT846188---191663-553354--49116930172
S136PRPFGSVSSPKVTSI2359---------------179--
Showing 1 to 10 of 49 rows
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Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S32NMPLTISSLKDGGKA-2.2e-3-----2.2e-3-----
S52RIGDVVLSIDGINAQ-----------
S76KIKGCTGSLNMTLQR-----------
T80CTGSLNMTLQRASAA2.2e-6-----1.3e-3--5.0e-4-
T110VVKPVPITSPAVSKV-----------
S111VKPVPITSPAVSKVT1.7e-4--4.4e-31.1e-8--1.0e-40.093.8e-40.010.0840.035
S119PAVSKVTSTNNMAYN1.7e-19--3.0e-6-1.4e-6---1.4e-79.9e-4
T120AVSKVTSTNNMAYNK-0.11--3.7e-19--0.525.1e-48.9e-4-1.6e-5-
S134KAPRPFGSVSSPKVT0.28----0.23---0.620.25-
S136PRPFGSVSSPKVTSI-----------
Showing 1 to 10 of 49 rows
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationCCRCCS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationCOADS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationGBMS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationHNSCCS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationLSCCS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationLUADS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationOVS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationPDACS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylationUCECS32S52S76T80T110S111S119T120S134S136S137T208T210S211S214T216S217S228Y251T255S257S260T275S282T290S309S313S319S322S325S329S332S335T341S342S354T355S360S362S372T373S377S379T381S385S391T417S438S593proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.