- PTPN6:
- protein tyrosine phosphatase non-receptor type 6
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S10 | RWFHRDLSGLDAETL | 10 | 982 | 67 | - | 69 | 58 | 54 | 54 | 90 | - | 64 | 36 | 53 | 48 | 66 | 58 | 20 | 4 | 92 | 36 | 95 | 18 |
S26 | KGRGVHGSFLARPSR | 8 | 575 | 17 | - | 57 | 52 | 22 | 23 | - | - | - | - | 28 | 25 | 97 | 84 | 7 | 2 | 49 | 21 | 84 | 7 |
S32 | GSFLARPSRKNQGDF | 3 | 88 | 18 | - | - | - | - | - | 9 | - | - | - | - | - | 33 | 28 | - | - | - | - | - | - |
S42 | NQGDFSLSVRVGDQV | 2 | 21 | - | - | - | - | - | - | - | - | - | - | 5 | 5 | - | - | - | - | - | - | 11 | - |
S57 | THIRIQNSGDFYDLY | 9 | 317 | 8 | - | 12 | 12 | - | - | 18 | - | 35 | 20 | 39 | 36 | 56 | 47 | 8 | 1 | 12 | 5 | 8 | - |
Y61 | IQNSGDFYDLYGGEK | 1 | 4 | - | - | - | - | - | - | - | - | - | - | 4 | - | - | - | - | - | - | - | - | - |
Y64 | SGDFYDLYGGEKFAT | 1 | 4 | - | - | - | - | - | - | - | - | - | - | 4 | - | - | - | - | - | - | - | - | - |
S140 | FLVRESLSQPGDFVL | 7 | 392 | - | - | 29 | 20 | - | - | 9 | - | 80 | 46 | 40 | 36 | 57 | 52 | - | - | 12 | 5 | 6 | - |
S186 | GGLETFDSLTDLVEH | 4 | 72 | - | - | 21 | 18 | 4 | 5 | - | - | - | - | - | - | 8 | 8 | - | - | - | - | 8 | - |
S250 | GFWEEFESLQKQEVK | 5 | 240 | 18 | - | 25 | 21 | - | - | - | - | 13 | 6 | 45 | 39 | 38 | 35 | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S10 | RWFHRDLSGLDAETL | 2.6e-42 | - | 3.7e-7 | 8.3e-6 | - | 3.8e-9 | 1.3e-3 | 4.9e-8 | - | 8.3e-12 | 2.8e-7 |
S26 | KGRGVHGSFLARPSR | 7.3e-5 | - | 0.06 | 0.74 | - | - | 0.17 | 3.9e-4 | - | 0.081 | - |
S32 | GSFLARPSRKNQGDF | 0.28 | - | - | - | - | - | - | 0.28 | - | - | - |
S42 | NQGDFSLSVRVGDQV | - | - | - | - | - | - | - | - | - | - | - |
S57 | THIRIQNSGDFYDLY | 9.5e-12 | - | - | - | - | 0.28 | 1.7e-9 | 2.5e-6 | - | - | - |
Y61 | IQNSGDFYDLYGGEK | - | - | - | - | - | - | - | - | - | - | - |
Y64 | SGDFYDLYGGEKFAT | - | - | - | - | - | - | - | - | - | - | - |
S140 | FLVRESLSQPGDFVL | -0.15 | - | 7.2e-4 | - | - | -0.12 | -0.014 | -0.024 | - | - | - |
S186 | GGLETFDSLTDLVEH | 0.057 | - | 0.057 | - | - | - | - | - | - | - | - |
S250 | GFWEEFESLQKQEVK | 9.5e-3 | - | 0.62 | - | - | - | 0.65 | 4.1e-4 | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |