Protein: ENSP00000327801
Gene: P4HB

LinkedOmicsKB © 2022-2023 Zhang Lab

P4HB:
prolyl 4-hydroxylase subunit beta

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S32HVLVLRKSNFAEALA972572-4939--63-9254454147447288383113
S75GKLKAEGSEIRLAKV724232-1662322--12620201312528----
S88KVDATEESDLAQQYG818415-1312--9-63403816168152--
S190PFGITSNSDVFSKYQ217------9-----------8-
S264ILLFLPKSVSDYDGK16----------------42--
S266LFLPKSVSDYDGKLS930524-883610-20153431--718036202
S273SDYDGKLSNFKTAAE411926-------221599----2513--
S281NFKTAAESFKGKILF114----------------95--
S331MTKYKPESEELTAER4142------35-------195472169
S357KIKPHLMSQELPEDW718514-2112--9-322015131617--124--
Showing 1 to 10 of 14 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S32HVLVLRKSNFAEALA0.068-3.2e-7---2e-71.3e-101.5e-7--1.7e-9-0.27
S75GKLKAEGSEIRLAKV-0.082--0.94---0.011----
S88KVDATEESDLAQQYG1.1e-3-----1.1e-3----
S190PFGITSNSDVFSKYQ-----------
S264ILLFLPKSVSDYDGK-----------
S266LFLPKSVSDYDGKLS-0.048-----1.1e-43e-16---1.6e-14-
S273SDYDGKLSNFKTAAE-7.6e-6-----8.6e-3----2.1e-4-
S281NFKTAAESFKGKILF-----------
S331MTKYKPESEELTAER-2e-8---------2e-8-
S357KIKPHLMSQELPEDW0.46-0.096---0.53-----
Showing 1 to 10 of 14 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationCCRCCS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationCOADS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationGBMS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationHNSCCS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationLSCCS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationLUADS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationOVS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationPDACS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylationUCECS32S75S88S190S264S266S273S281S331S357S439S449T462S472proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.