Protein: ENSP00000333982
Gene: NDEL1

LinkedOmicsKB © 2022-2023 Zhang Lab

NDEL1:
nudE neurodevelopment protein 1 like 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S194QQEVTRKSAPSSPTL1058917-72575418-9755546660391073637
S197VTRKSAPSSPTLDCE1036613-12414139-9755544844622596-
S198TRKSAPSSPTLDCEK10102674-3532908199-472750467570491090389518
S215SAVQASLSLPATPVG1091397-33307299-10259787093852775020477
T219ASLSLPATPVGKGTE961035-2521131353-5032595510192--187306
S231GTENTFPSPKAIPNG101114113-8764393399-835110395756719566297016
S242IPNGFGTSPLTPSAR3107------63-128--------1311
T245GFGTSPLTPSARISA385----------5497----537
S285KDQASRKSYISGNVN33318-----------44----7-
S310FSRSGHTSFFDKGAV188-------------------
Showing 1 to 10 of 14 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S194QQEVTRKSAPSSPTL0.017-2.4e-6--0.57-0.32-0.13--
S197VTRKSAPSSPTLDCE0.42----0.64-0.5---
S198TRKSAPSSPTLDCEK3.3e-5--0.261e-7-2.4e-33.2e-32.7e-5-0.014-1.4e-73.8e-7
S215SAVQASLSLPATPVG0.31-0.011---0.86-0.0750.59-0.25-
T219ASLSLPATPVGKGTE-8.7e-3-0.28---1.8e-5-1.1e-30.21---
S231GTENTFPSPKAIPNG0.14-0.29-1.8e-4--0.67.3e-53.5e-7--7.4e-72.9e-3
S242IPNGFGTSPLTPSAR-----------
T245GFGTSPLTPSARISA-----------
S285KDQASRKSYISGNVN-----------
S310FSRSGHTSFFDKGAV-----------
Showing 1 to 10 of 14 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationCCRCCS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationCOADS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationGBMS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationHNSCCS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationLSCCS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationLUADS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationOVS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationPDACS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylationUCECS194S197S198S215T219S231S242T245S285S310S331S335S336S344proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.