PDE2A: phosphodiesterase 2A
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1z1l chain A
3ibj chain A
3ibj chain B
3itm chain A
3itm chain B
3itm chain C
3itm chain D
3itu chain A
3itu chain B
3itu chain C
3itu chain D
4c1i chain A
4c1i chain B
4c1i chain C
4c1i chain D
4d08 chain A
4d08 chain B
4d08 chain C
4d08 chain D
4d09 chain A
4d09 chain B
4d09 chain C
4d09 chain D
4htx chain A
4htx chain B
4htx chain C
4htx chain D
4htz chain A
4htz chain B
4htz chain C
4htz chain D
4jib chain A
4jib chain B
4jib chain C
4jib chain D
5tz3 chain A
5tz3 chain B
5tz3 chain C
5tz3 chain D
5tza chain A
5tza chain B
5tza chain C
5tza chain D
5tzc chain A
5tzc chain B
5tzc chain C
5tzc chain D
5tzh chain A
5tzh chain B
5tzh chain C
5tzh chain D
5tzw chain A
5tzw chain B
5tzw chain C
5tzw chain D
5tzx chain A
5tzx chain B
5tzx chain C
5tzx chain D
5tzz chain A
5tzz chain B
5tzz chain C
5tzz chain D
5u00 chain A
5u00 chain B
5u00 chain C
5u00 chain D
5u7d chain A
5u7d chain B
5u7d chain C
5u7i chain A
5u7i chain B
5u7i chain C
5u7i chain D
5u7j chain A
5u7j chain B
5u7j chain C
5u7j chain D
5u7k chain A
5u7k chain B
5u7k chain C
5u7k chain D
5u7l chain A
5u7l chain B
5u7l chain C
5vp0 chain A
5vp0 chain B
5vp0 chain C
5vp1 chain A
5vp1 chain B
5vp1 chain C
5xkm chain A
5xkm chain B
5xkm chain C
5xkm chain D
5xkm chain E
5xkm chain F
6b96 chain A
6b96 chain B
6b97 chain A
6b97 chain B
6b98 chain A
6b98 chain B
6blf chain A
6blf chain B
6c7d chain A
6c7d chain B
6c7d chain C
6c7d chain D
6c7e chain A
6c7e chain B
6c7e chain C
6c7e chain D
6c7f chain A
6c7f chain B
6c7f chain C
6c7g chain A
6c7g chain B
6c7g chain C
6c7g chain D
6c7i chain A
6c7i chain B
6c7i chain C
6c7i chain D
6c7j chain A
6c7j chain B
6c7j chain C
6c7j chain D
6cyb chain A
6cyb chain B
6cyc chain A
6cyc chain B
6cyd chain A
6cyd chain B
6ezf chain A
6znd chain A
6znd chain B
6zqz chain A
6zqz chain B
6zqz chain C
6zqz chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S909 FTIRGLPS NNSLDFL 4 82 - - 4 4 - - - - 12 8 20 18 8 8 - - - - - - S912 RGLPSNNS LDFLDEE 9 691 17 - 86 64 33 38 26 - 94 56 73 68 43 41 6 2 32 12 - - Y920 LDFLDEEY EVPDLDG 2 17 - - 8 - - - - - - - 5 4 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S909 FTIRGLPS NNSLDFL -5.5e-7 - - - - - -5.5e-7 - - - - S912 RGLPSNNS LDFLDEE -1.2e-44 - -0.065 -1.0e-4 - -6.5e-21 -1.3e-18 -1.5e-16 - -0.03 - Y920 LDFLDEEY EVPDLDG - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S909
S912
Y920
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S909 S912 Y920 protein RNA SCNV methylation CCRCC S909 S912 Y920 protein RNA SCNV methylation COAD S909 S912 Y920 protein RNA SCNV methylation GBM S909 S912 Y920 protein RNA SCNV methylation HNSCC S909 S912 Y920 protein RNA SCNV methylation LSCC S909 S912 Y920 protein RNA SCNV methylation LUAD S909 S912 Y920 protein RNA SCNV methylation OV S909 S912 Y920 protein RNA SCNV methylation PDAC S909 S912 Y920 protein RNA SCNV methylation UCEC S909 S912 Y920 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S909
S912
Y920
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S909
S912
Y920
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.