Protein: ENSP00000336721
Gene: LARP1

LinkedOmicsKB © 2022-2023 Zhang Lab

LARP1:
La ribonucleoprotein 1, translational regulator

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S38RLPGRKNSVALAAAP842966-4023----161055454034891388-
S88VPKQRKGSKVGDFGD1117----6255--------------
S138EQEKGEGSDSKESPK7331----685745---5454541352636
S140EKGEGSDSKESPKTK19------------54------
S143EGSDSKESPKTKSDE871322---373599---7370544942888368218
S148KESPKTKSDESGEEK101246113-10380584999-103591039410292288105446-
S151PKTKSDESGEEKNGD9120595-876597100--8651103959285831967293813
S216GEIKGSESATYVPVA332--54--------54--104--
T218IKGSESATYVPVAPP18------8-------------
T226YVPVAPPTPAWQPEI91037113-9472323970-713888829280--87392614
Showing 1 to 10 of 66 rows
102550100
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S38RLPGRKNSVALAAAP-0.093--0.08----1e-9--3.7e-13-
S88VPKQRKGSKVGDFGD-0.66---0.66-------
S138EQEKGEGSDSKESPK1.9e-4--0.007----0.01--
S140EKGEGSDSKESPKTK-----------
S143EGSDSKESPKTKSDE0.31--5.4e-4--1.4e-39.1e-11--8.8e-10-1.9e-6
S148KESPKTKSDESGEEK4.6e-11-19.2e-12--0.741.4e-52.9e-7--0.22-
S151PKTKSDESGEEKNGD5.9e-23--0.372.3e-24-0.226.2e-217.1e-238.2e-4-1.1e-4-0.19
S216GEIKGSESATYVPVA-----------
T218IKGSESATYVPVAPP-----------
T226YVPVAPPTPAWQPEI6.6e-8-2.4e-140.054--2e-88e-121.5e-17--7.2e-3-0.019
Showing 1 to 10 of 66 rows
102550100
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationCCRCCS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationCOADS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationGBMS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationHNSCCS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationLSCCS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationLUADS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationOVS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationPDACS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylationUCECS38S88S138S140S143S148S151S216T218T226T245S247S250T299Y414S440S444T449S469S471S477S507S514S519T545T547S550S554Y556T572S595S639T645T647S689T692T693S697Y700T705T708T711S747S753T768S770S772S773S774S776T779T781S784Y785T788S791S963S979S981S982S983S990T994T1008S1009S1012proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.