Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2vgb chain A
2vgb chain B
2vgb chain C
2vgb chain D
2vgf chain A
2vgf chain B
2vgf chain C
2vgf chain D
2vgg chain A
2vgg chain B
2vgg chain C
2vgg chain D
2vgi chain A
2vgi chain B
2vgi chain C
2vgi chain D
4ima chain A
4ima chain B
4ima chain C
4ima chain D
4ip7 chain A
4ip7 chain B
4ip7 chain C
4ip7 chain D
6nn4 chain A
6nn4 chain B
6nn4 chain C
6nn4 chain D
6nn5 chain A
6nn5 chain B
6nn5 chain C
6nn5 chain D
6nn7 chain A
6nn7 chain B
6nn7 chain C
6nn7 chain D
6nn7 chain E
6nn7 chain F
6nn7 chain G
6nn7 chain H
6nn8 chain A
6nn8 chain B
6nn8 chain C
6nn8 chain D
6nn8 chain E
6nn8 chain F
6nn8 chain G
6nn8 chain H
7qdn chain A
7qdn chain B
7qdn chain C
7qdn chain D
7qdn chain E
7qdn chain F
7qdn chain G
7qdn chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S144 AVESFAGS PLSYRPV 5 359 - - 103 80 - - 10 - - - 35 33 45 40 - - - - 4 9 S292 ASFVRKAS DVAAVRA 1 175 - - 99 76 - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S144 AVESFAGS PLSYRPV -3.7e-52 - -2.3e-19 - - - -2.7e-17 -7.6e-19 - - - S292 ASFVRKAS DVAAVRA -2.6e-25 - -2.6e-25 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S144
S292
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S144 S292 protein RNA SCNV methylation CCRCC S144 S292 protein RNA SCNV methylation COAD S144 S292 protein RNA SCNV methylation GBM S144 S292 protein RNA SCNV methylation HNSCC S144 S292 protein RNA SCNV methylation LSCC S144 S292 protein RNA SCNV methylation LUAD S144 S292 protein RNA SCNV methylation OV S144 S292 protein RNA SCNV methylation PDAC S144 S292 protein RNA SCNV methylation UCEC S144 S292 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S144
S292
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S144
S292
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.