Protein: ENSP00000340184

LIMA1:: LIM domain and actin binding 1

Lollipop plot

Phosphosites location and occurrence

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* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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				BRCA		CCRCC		COAD		GBM		HNSCC		LSCC		LUAD		OV		PDAC		UCEC
Site	Sequence	Cohorts	Total	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N
S13	FNRRQWTSLSLRVTA	2	18	-	-	5	4	-	-	-	-	-	-	-	-	-	-	-	-	7	2	-	-
S15	RRQWTSLSLRVTAKE	10	1385	122	-	99	76	94	94	46	-	108	62	98	90	110	101	40	10	105	44	73	13
S24	RVTAKELSLVNKNKS	4	265	-	-	66	52	-	-	-	-	-	-	-	-	59	51	-	-	12	4	18	3
T57	MEKKRSNTENLSQHF	10	502	55	-	4	3	44	45	28	-	23	12	54	50	41	35	71	15	3	2	5	12
S61	RSNTENLSQHFRKGT	10	1208	91	-	95	72	72	80	81	-	27	16	93	85	110	101	76	18	68	27	78	18
T68	SQHFRKGTLTVLKKK	3	134	-	-	27	27	30	41	-	-	-	-	-	-	5	4	-	-	-	-	-	-
T87	GLGAESHTDSLRNSS	3	40	8	-	12	12	-	-	-	-	-	-	-	-	4	4	-	-	-	-	-	-
S89	GAESHTDSLRNSSTE	8	244	16	-	5	4	-	-	27	-	6	3	20	19	21	21	-	-	54	24	10	14
S93	HTDSLRNSSTEIRHR	9	558	29	-	13	10	21	15	82	-	53	29	60	56	23	21	-	-	85	37	20	4
S94	TDSLRNSSTEIRHRA	4	251	-	-	32	16	-	-	-	-	-	-	35	31	48	45	-	-	30	14	-	-

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Tumor and normal comparison

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Site	Sequence	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
S13	FNRRQWTSLSLRVTA	-	-	-	-	-	-	-	-	-	-	-
S15	RRQWTSLSLRVTAKE	-3e-13	-	0.019	-5.8e-17	-	-1.9e-9	-3.5e-10	-4.7e-3	-4.3e-4	1.2e-6	-0.41
S24	RVTAKELSLVNKNKS	8.9e-8	-	0.013	-	-	-	-	3.6e-7	-	-	-
T57	MEKKRSNTENLSQHF	-1.1e-9	-	-	-0.065	-	0.42	-5.9e-14	-1.2e-6	-0.81	-	-
S61	RSNTENLSQHFRKGT	-0.014	-	6.9e-12	-7.1e-5	-	-0.65	-1.2e-14	-7.4e-12	0.93	0.019	5.7e-3
T68	SQHFRKGTLTVLKKK	-8.7e-4	-	-0.74	-1.2e-5	-	-	-	-	-	-	-
T87	GLGAESHTDSLRNSS	-	-	-	-	-	-	-	-	-	-	-
S89	GAESHTDSLRNSSTE	0.037	-	-	-	-	-	0.48	0.23	-	0.088	-
S93	HTDSLRNSSTEIRHR	-7.5e-4	-	-	-0.042	-	-0.091	-1.8e-8	-1.9e-3	-	8.5e-7	-
S94	TDSLRNSSTEIRHRA	4.6e-3	-	0.63	-	-	-	-1.5e-4	1.8e-10	-	9.3e-3	-

Showing 1 to 10 of 74 rows

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* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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			Signed p-values
Phenotype	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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			Signed p-values
Kinase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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			Signed p-values
Phosphatase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Protein: ENSP00000340184Gene: LIMA1

Lollipop plot

Structure

Phosphosite detection coverage

Tumor and normal comparison

Phenotype and mutation association

Cis-association

Kinase association

Phosphatase association

Protein: ENSP00000340184
Gene: LIMA1