TRIM29: tripartite motif containing 29
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S12 DASRSNGS SPEARDA 1 19 - - - - - - - - - - 14 5 - - - - - - - - S13 ASRSNGSS PEARDAR 4 203 - - - - - - - - 32 21 80 48 - - 15 1 4 2 - - S21 PEARDARS PSGPSGS 8 1051 95 - - - 55 52 - - 108 62 103 85 71 64 82 19 105 43 89 18 S23 ARDARSPS GPSGSLE 1 5 - - - - - - - - - - - - - - - - 3 2 - - S26 ARSPSGPS GSLENGT 1 9 - - - - - - - - 5 4 - - - - - - - - - - S28 SPSGPSGS LENGTKA 5 358 15 - - - - - - - 77 41 73 60 - - - - 42 14 32 4 S55 GEAAEGKS LGSALKP 1 117 - - - - - - - - 72 45 - - - - - - - - - - S58 AEGKSLGS ALKPGEG 2 72 - - - - - - - - 40 23 5 4 - - - - - - - - S67 LKPGEGRS ALFAGNE 6 402 9 - - - - - - - 102 59 103 93 - - 8 1 9 2 12 4 S85 PIIQFVES GDDKNSN 4 349 23 - - - - - - - 108 62 78 69 - - - - - - 7 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S12 DASRSNGS SPEARDA - - - - - - - - - - - S13 ASRSNGSS PEARDAR 1.4e-4 - - - - -0.052 2.5e-13 - - - - S21 PEARDARS PSGPSGS 4.2e-14 - - 3.1e-11 - -1.4e-9 1.3e-25 -0.044 -0.042 6.8e-14 4.2e-8 S23 ARDARSPS GPSGSLE - - - - - - - - - - - S26 ARSPSGPS GSLENGT - - - - - - - - - - - S28 SPSGPSGS LENGTKA 5.3e-9 - - - - -0.017 9.5e-18 - - 8.9e-5 - S55 GEAAEGKS LGSALKP -0.036 - - - - -0.036 - - - - - S58 AEGKSLGS ALKPGEG -0.52 - - - - -0.52 - - - - - S67 LKPGEGRS ALFAGNE 2e-25 - - - - 3.8e-6 4.6e-24 - - - - S85 PIIQFVES GDDKNSN 0.028 - - - - -1.1e-9 3.1e-20 - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S12
S13
S21
S23
S26
S28
S55
S58
S67
S85
S95
S98
S104
Y106
S130
S133
S135
T139
S141
S152
T158
S162
S164
S166
S168
S193
S272
S301
S457
S463
S472
T476
S484
S488
S489
Y506
S522
S526
S536
S538
S540
Y544
Y571
S584
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation CCRCC S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation COAD S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation GBM S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation HNSCC S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation LSCC S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation LUAD S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation OV S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation PDAC S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation UCEC S12 S13 S21 S23 S26 S28 S55 S58 S67 S85 S95 S98 S104 Y106 S130 S133 S135 T139 S141 S152 T158 S162 S164 S166 S168 S193 S272 S301 S457 S463 S472 T476 S484 S488 S489 Y506 S522 S526 S536 S538 S540 Y544 Y571 S584 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S12
S13
S21
S23
S26
S28
S55
S58
S67
S85
S95
S98
S104
Y106
S130
S133
S135
T139
S141
S152
T158
S162
S164
S166
S168
S193
S272
S301
S457
S463
S472
T476
S484
S488
S489
Y506
S522
S526
S536
S538
S540
Y544
Y571
S584
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S12
S13
S21
S23
S26
S28
S55
S58
S67
S85
S95
S98
S104
Y106
S130
S133
S135
T139
S141
S152
T158
S162
S164
S166
S168
S193
S272
S301
S457
S463
S472
T476
S484
S488
S489
Y506
S522
S526
S536
S538
S540
Y544
Y571
S584
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.