- USP1:
- ubiquitin specific peptidase 1
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S13 | PSESNGLSRGSPSKK | 1 | 7 | - | - | - | - | - | - | - | - | 5 | 2 | - | - | - | - | - | - | - | - | - | - |
S16 | SNGLSRGSPSKKNRL | 7 | 301 | 52 | - | - | - | - | - | 46 | - | 29 | 15 | 34 | 31 | 4 | 3 | - | - | 17 | 9 | 45 | 16 |
S42 | RALDFTDSQENEEKA | 1 | 9 | - | - | - | - | - | - | - | - | - | - | 5 | 4 | - | - | - | - | - | - | - | - |
S66 | QVVPAAQSSPINCEK | 7 | 350 | 80 | - | 35 | 19 | 5 | 4 | - | - | 52 | 26 | 29 | 26 | 31 | 27 | 12 | 4 | - | - | - | - |
S67 | VVPAAQSSPINCEKR | 10 | 458 | 9 | - | 8 | 7 | 61 | 64 | 72 | - | 21 | 15 | 10 | 10 | 4 | 4 | 29 | 5 | 33 | 14 | 83 | 9 |
S292 | KLSKEHQSLEENQRQ | 7 | 238 | 4 | - | - | - | 3 | 6 | 81 | - | - | - | 25 | 21 | 4 | 4 | 60 | 14 | - | - | 5 | 11 |
S313 | ATSDTLESPPKIIPK | 10 | 541 | 96 | - | 12 | 12 | 11 | 7 | 63 | - | 43 | 27 | 45 | 40 | 5 | 4 | 49 | 11 | 12 | 5 | 84 | 15 |
S327 | KYISENESPRPSQKK | 9 | 746 | 113 | - | - | - | 17 | 10 | 36 | - | 97 | 56 | 59 | 55 | 60 | 52 | 70 | 15 | 17 | 7 | 75 | 7 |
S398 | TNGCGLESPGNTVTP | 6 | 124 | - | - | 8 | 8 | - | - | - | - | 27 | 15 | 5 | 5 | 9 | 8 | - | - | 5 | 1 | 17 | 16 |
S471 | ELSKVEESSEISPEP | 1 | 22 | 22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S13 | PSESNGLSRGSPSKK | - | - | - | - | - | - | - | - | - | - | - |
S16 | SNGLSRGSPSKKNRL | 8.4e-16 | - | - | - | - | 1.1e-6 | 1.2e-15 | - | - | - | 0.29 |
S42 | RALDFTDSQENEEKA | - | - | - | - | - | - | - | - | - | - | - |
S66 | QVVPAAQSSPINCEK | 5.6e-5 | - | -0.47 | - | - | 0.99 | 0.021 | 1.1e-10 | - | - | - |
S67 | VVPAAQSSPINCEKR | 0.21 | - | - | 2.4e-6 | - | -0.23 | - | - | - | -0.18 | - |
S292 | KLSKEHQSLEENQRQ | 0.012 | - | - | - | - | - | 5.1e-3 | - | 0.45 | - | - |
S313 | ATSDTLESPPKIIPK | 3.4e-10 | - | - | - | - | 8.6e-4 | 2.1e-12 | - | 0.47 | - | 0.14 |
S327 | KYISENESPRPSQKK | 1.7e-46 | - | - | - | - | 1.6e-12 | 4.5e-20 | 4.8e-15 | 5.1e-6 | - | - |
S398 | TNGCGLESPGNTVTP | -2.1e-3 | - | - | - | - | -2.1e-3 | - | - | - | - | - |
S471 | ELSKVEESSEISPEP | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |