Protein: ENSP00000345292
Gene: NDRG3

LinkedOmicsKB © 2022-2023 Zhang Lab

NDRG3:
NDRG family member 3

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
Y308KLTEAFKYFLQGMGY16--------------6-----
S318QGMGYIPSASMTRLA930032-2718--9-4222353025251231046-
S320MGYIPSASMTRLARS7264--86292536---44422220--41252
S327SMTRLARSRTHSTSS18--------------71----
T329TRLARSRTHSTSSSL81719---191754-26164443--42-9
S331LARSRTHSTSSSLGS1076440-44595862-975545424439731649214016
S333RSRTHSTSSSLGSGE71488---458-5420182419----312
S334SRTHSTSSSLGSGES829617---4562-221344402219196--212
S335RTHSTSSSLGSGESP839330---242189-241235321311577--38-
S338STSSSLGSGESPFSR3116------80-1710----72----
Showing 1 to 10 of 19 rows
1025
rows per page

Tumor and normal comparison

Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Y308KLTEAFKYFLQGMGY-----------
S318QGMGYIPSASMTRLA0.34--0.67--0.153.9e-3-0.045---
S320MGYIPSASMTRLARS-0.46---7.3e-4--0.0580.85---
S327SMTRLARSRTHSTSS-----------
T329TRLARSRTHSTSSSL0.43----0.43-----
S331LARSRTHSTSSSLGS-0.68---3.4e-7-1.8e-4-0.0630.0590.770.32-0.28
S333RSRTHSTSSSLGSGE8.9e-4-----0.761.1e-5---
S334SRTHSTSSSLGSGES0.03----0.003-0.810.31---
S335RTHSTSSSLGSGESP7.8e-3---0.85-3.3e-40.23----
S338STSSSLGSGESPFSR-----------
Showing 1 to 10 of 19 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

Loading, please wait
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationCCRCCY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationCOADY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationGBMY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationHNSCCY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationLSCCY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationLUADY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationOVY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationPDACY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylationUCECY308S318S320S327T329S331S333S334S335S338S341S346S349S352T355S358S361T370S374proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

Loading, please wait
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.