ARID4A: AT-rich interaction domain 4A
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2lcc chain A
2mam chain A
2yrv chain A
6bph chain A
6l87 chain A
7smc chain B
7smc chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S105 ERTLRRTS LCLKGER 7 479 - - 55 49 - - 8 - 42 21 30 29 84 77 - - 43 20 18 3 S146 KTNRGRRS SLPVTED 2 11 - - - - - - - - - - - - - - - - 3 2 6 - S147 TNRGRRSS LPVTEDE 7 933 - - 94 72 - - 99 - 108 62 84 78 43 40 - - 99 41 95 18 T151 RRSSLPVT EDEKEEE 7 517 - - 49 32 - - 9 - 40 24 45 42 49 44 - - 75 32 61 15 S159 EDEKEEES SEEEDED 7 892 - - 103 80 - - 10 - 102 58 108 99 98 88 - - 98 42 6 - S160 DEKEEESS EEEDEDK 7 986 - - 103 80 - - 10 - 102 58 108 99 98 88 - - 98 42 82 18 S276 SEILESSS SDDEDGP 3 51 - - - - - - - - - - 4 4 - - - - 13 7 18 5 S277 EILESSSS DDEDGPA 3 59 - - - - - - - - - - 4 4 - - - - 13 7 24 7 S427 EKKDLEES MEEALKL 4 116 - - - - - - - - 35 21 10 10 - - - - 5 2 18 15 T441 LDQEMPLT EVKSEPE 1 8 - - 4 4 - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S105 ERTLRRTS LCLKGER -7.2e-5 - 6.4e-5 - - -0.86 -4.8e-8 -6.3e-8 - -0.068 - S146 KTNRGRRS SLPVTED - - - - - - - - - - - S147 TNRGRRSS LPVTEDE -0.5 - 0.18 - - 0.24 0.042 8.5e-3 - -3.7e-13 0.085 T151 RRSSLPVT EDEKEEE -3.7e-3 - 0.78 - - -0.18 0.54 2.7e-3 - -4.9e-14 -0.032 S159 EDEKEEES SEEEDED -0.26 - -2.8e-20 - - 4.0e-4 2e-13 1.0e-4 - -5.1e-5 - S160 DEKEEESS EEEDEDK -0.38 - -2.8e-20 - - 4.0e-4 2e-13 1.0e-4 - -5.1e-5 -2.6e-4 S276 SEILESSS SDDEDGP - - - - - - - - - - - S277 EILESSSS DDEDGPA - - - - - - - - - - - S427 EKKDLEES MEEALKL 0.27 - - - - 0.27 - - - - - T441 LDQEMPLT EVKSEPE - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S105
S146
S147
T151
S159
S160
S276
S277
S427
T441
S445
S453
S455
S457
S538
S542
S557
S561
S651
S676
S677
S716
S789
S803
S840
T842
S863
S864
S932
S1007
S1018
T1026
S1031
S1076
T1105
S1108
S1109
S1111
S1140
S1145
S1164
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation CCRCC S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation COAD S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation GBM S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation HNSCC S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation LSCC S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation LUAD S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation OV S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation PDAC S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation UCEC S105 S146 S147 T151 S159 S160 S276 S277 S427 T441 S445 S453 S455 S457 S538 S542 S557 S561 S651 S676 S677 S716 S789 S803 S840 T842 S863 S864 S932 S1007 S1018 T1026 S1031 S1076 T1105 S1108 S1109 S1111 S1140 S1145 S1164 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S105
S146
S147
T151
S159
S160
S276
S277
S427
T441
S445
S453
S455
S457
S538
S542
S557
S561
S651
S676
S677
S716
S789
S803
S840
T842
S863
S864
S932
S1007
S1018
T1026
S1031
S1076
T1105
S1108
S1109
S1111
S1140
S1145
S1164
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S105
S146
S147
T151
S159
S160
S276
S277
S427
T441
S445
S453
S455
S457
S538
S542
S557
S561
S651
S676
S677
S716
S789
S803
S840
T842
S863
S864
S932
S1007
S1018
T1026
S1031
S1076
T1105
S1108
S1109
S1111
S1140
S1145
S1164
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.