CDC16: cell division cycle 16
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3hym chain B
3hym chain D
3hym chain F
3hym chain H
3hym chain J
3hym chain L
4ui9 chain J
4ui9 chain K
5a31 chain J
5a31 chain K
5g04 chain J
5g04 chain K
5g05 chain J
5g05 chain K
5khr chain J
5khr chain K
5khu chain J
5khu chain K
5l9t chain J
5l9t chain K
5l9u chain J
5l9u chain K
5lcw chain J
5lcw chain K
6q6g chain K
6q6g chain Q
6q6h chain K
6q6h chain Q
6tlj chain J
6tlj chain K
6tm5 chain J
6tm5 chain K
6tnt chain J
6tnt chain K
7qe7 chain K
7qe7 chain Q
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S560 KTLKNIIS PPWDFRE 10 1399 113 - 103 80 59 49 81 - 108 62 108 99 110 101 61 15 105 44 83 18 T581 TAEETGLT PLETSRK 9 540 9 - 30 19 10 8 18 - 44 26 69 63 51 45 - - 26 14 90 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S560 KTLKNIIS PPWDFRE 2.3e-5 - 0.003 7.2e-6 - 0.011 0.46 0.011 0.28 -4.8e-8 1.9e-3 T581 TAEETGLT PLETSRK 5.7e-5 - 0.15 - - 0.007 2.1e-4 3.9e-6 - -7.5e-3 0.94
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S560
T581
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S560 T581 protein RNA SCNV methylation CCRCC S560 T581 protein RNA SCNV methylation COAD S560 T581 protein RNA SCNV methylation GBM S560 T581 protein RNA SCNV methylation HNSCC S560 T581 protein RNA SCNV methylation LSCC S560 T581 protein RNA SCNV methylation LUAD S560 T581 protein RNA SCNV methylation OV S560 T581 protein RNA SCNV methylation PDAC S560 T581 protein RNA SCNV methylation UCEC S560 T581 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S560
T581
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S560
T581
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.