Protein: ENSP00000348578
Gene: G3BP1

LinkedOmicsKB © 2022-2023 Zhang Lab

G3BP1:
G3BP stress granule assembly factor 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S38HRFYGKNSSYVHGGL19------9-------------
S47YVHGGLDSNGKPADA22718-----9-------------
S67EIHRKVMSQNFTNCH61238-----9-64101097----537
T143EVFGGFVTEPQEESE412960-2212------551312------
S149VTEPQEESEEEVEEP10150595-99769710099-1086210899110997516105449518
S230APEDAQKSSSPAPAD1050631-6957549-3823787354411776318
S231PEDAQKSSSPAPADI677--98--9-73--54215--6-
S232EDAQKSSSPAPADIA101521122-103809710099-108621089911099831985349518
S250QEDLRTFSWASVTSK10102377-6760161145-1035889819284641140188918
S253LRTFSWASVTSKNLP718581-44----1612109--13432189
Showing 1 to 10 of 12 rows
1025
rows per page

Tumor and normal comparison

Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S38HRFYGKNSSYVHGGL-----------
S47YVHGGLDSNGKPADA-----------
S67EIHRKVMSQNFTNCH-----------
T143EVFGGFVTEPQEESE-0.93--0.93--------
S149VTEPQEESEEEVEEP4.7e-6--0.112.1e-6--0.174.1e-161.2e-8-0.19-0.0140.26
S230APEDAQKSSSPAPAD0.018--0.28---6.2e-43.1e-4---1.8e-8
S231PEDAQKSSSPAPADI-----------
S232EDAQKSSSPAPADIA4.8e-3--1.4e-30.18--1.3e-101.7e-16-0.820.93.1e-72.6e-3
S250QEDLRTFSWASVTSK2.2e-38-0.44--9.8e-152.9e-266.6e-110.0411.5e-60.075
S253LRTFSWASVTSKNLP-----------
Showing 1 to 10 of 12 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

Loading, please wait
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationCCRCCS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationCOADS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationGBMS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationHNSCCS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationLSCCS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationLUADS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationOVS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationPDACS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylationUCECS38S47S67T143S149S230S231S232S250S253S339S373proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

Loading, please wait
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.