Protein: ENSP00000350170
Gene: FXR1

LinkedOmicsKB © 2022-2023 Zhang Lab

FXR1:
FMR1 autosomal homolog 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S60PDIKKEISEGDEVEV111------------------11-
S403TSGYGTNSELSNPSE468--44----241154------142
S406YGTNSELSNPSETES7869--7057--99-10359103917566--26138918
S409NSELSNPSETESERK7620--1616--89-633758514037--94406316
T411ELSNPSETESERKDE449------26---55----3253
S413SNPSETESERKDELS218----------------32112
S420SERKDELSDWSLAGE7310--44--9-362020198881--53165
S423KDELSDWSLAGEDDR7671--4138--62-693994875044--5118726
S432AGEDDRDSRHQRDSR7704--2824--46-734493847667--53208016
S464GPRGGKSSISSVLKD18----------44--------
Showing 1 to 10 of 22 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S60PDIKKEISEGDEVEV-----------
S403TSGYGTNSELSNPSE0.49----0.49-----
S406YGTNSELSNPSETES4e-18--4.7e-6--5.9e-59.2e-302.1e-12--0.0546.9e-8
S409NSELSNPSETESERK-0.39-----0.828.8e-76.0e-4--6.7e-110.75
T411ELSNPSETESERKDE-----------
S413SNPSETESERKDELS-----------
S420SERKDELSDWSLAGE5e-11----0.0483.3e-62.1e-6---
S423KDELSDWSLAGEDDR7.6e-21-0.85--3.3e-92.2e-263.6e-7--0.38-
S432AGEDDRDSRHQRDSR1.9e-24-0.29--3.2e-79.3e-231.5e-14--5.3e-33.9e-5
S464GPRGGKSSISSVLKD-----------
Showing 1 to 10 of 22 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationCCRCCS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationCOADS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationGBMS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationHNSCCS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationLSCCS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationLUADS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationOVS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationPDACS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylationUCECS60S403S406S409T411S413S420S423S432S464S478T483S485T488S496S499T511S528T584S587T597T611proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.