- APOL2:
- apolipoprotein L2
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S187 | QARNLDQSGTNVAKV | 8 | 593 | 33 | - | 23 | 20 | - | - | 54 | - | 74 | 44 | 44 | 40 | 67 | 61 | - | - | 51 | 20 | 48 | 14 |
T203 | KEFVGGNTPNVLTLV | 6 | 223 | - | - | 32 | 21 | - | - | 26 | - | 53 | 34 | 13 | 11 | 8 | 7 | - | - | - | - | 18 | - |
S250 | PHVIGRISAEGGEQV | 9 | 447 | - | - | 29 | 17 | 4 | 5 | 36 | - | 61 | 36 | 63 | 57 | 18 | 16 | 36 | 7 | 32 | 14 | 16 | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S187 | QARNLDQSGTNVAKV | 2.0e-5 | - | 0.17 | - | - | 1.8e-11 | 0.92 | -0.14 | - | 1.3e-5 | -0.53 |
T203 | KEFVGGNTPNVLTLV | 0.44 | - | 0.56 | - | - | 0.62 | - | - | - | - | - |
S250 | PHVIGRISAEGGEQV | 1.3e-5 | - | 0.026 | - | - | 4.2e-7 | 0.02 | - | - | -0.38 | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |