Protein: ENSP00000351596
Gene: TTC37

LinkedOmicsKB © 2022-2023 Zhang Lab

TTC37:
tetratricopeptide repeat domain 37

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S401LAYRNKGSFDEAAKI16--33----------------
S1079KAYERALSIVESEQD215------9-----------6-
Showing 1 to 2 of 2 rows

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S401LAYRNKGSFDEAAKI-----------
S1079KAYERALSIVESEQD-----------
Showing 1 to 2 of 2 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
cibersort: MonocyteS1079-----------
cibersort: Macrophage M0S1079-----------
cibersort: T cell regulatory (Tregs)S1079-----------
cibersort: NK cell activatedS1079-----------
cibersort: T cell gamma deltaS1079-----------
cibersort: T cell follicular helperS1079-----------
cibersort: B cell memoryS1079-----------
cibersort: B cell naiveS1079-----------
cibersort: T cell CD4+ memory activatedS1079-----------
cibersort: NK cell restingS1079-----------
Showing 1 to 10 of 516 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS401S1079proteinRNASCNVmethylationCCRCCS401S1079proteinRNASCNVmethylationCOADS401S1079proteinRNASCNVmethylationGBMS401S1079proteinRNASCNVmethylationHNSCCS401S1079proteinRNASCNVmethylationLSCCS401S1079proteinRNASCNVmethylationLUADS401S1079proteinRNASCNVmethylationOVS401S1079proteinRNASCNVmethylationPDACS401S1079proteinRNASCNVmethylationUCECS401S1079proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
ADCK1S1079-----------
ADCK2S1079-----------
ACVR1CS1079-----------
ACVRL1S1079-----------
ACVR2AS1079-----------
ACVR1BS1079-----------
ABRS1079-----------
ABL2S1079-----------
ACVR1S1079-----------
ACVR2BS1079-----------
Showing 1 to 10 of 1076 rows

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
ALPIS1079-----------
ALPLS1079-----------
ACP5S1079-----------
ALPGS1079-----------
ACP6S1079-----------
ACP4S1079-----------
ACP2S1079-----------
ACP1S1079-----------
ACP3S1079-----------
ACP7S1079-----------
Showing 1 to 10 of 480 rows

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.