- PTPRF:
- protein tyrosine phosphatase receptor type F
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S1294 | KRTHSPSSKDEQSIG | 1 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 6 | 2 | - | - | - | - |
S1299 | PSSKDEQSIGLKDSL | 1 | 8 | - | - | - | - | - | - | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - |
S1305 | QSIGLKDSLLAHSSD | 3 | 191 | - | - | - | - | - | - | 91 | - | 56 | 28 | - | - | - | - | 13 | 3 | - | - | - | - |
S1310 | KDSLLAHSSDPVEMR | 2 | 79 | - | - | - | - | - | - | 18 | - | - | - | - | - | - | - | 50 | 11 | - | - | - | - |
S1311 | DSLLAHSSDPVEMRR | 5 | 84 | - | - | - | - | 4 | 5 | 27 | - | - | - | 5 | 4 | - | - | 14 | 3 | - | - | 20 | 2 |
Y1356 | GLKFSQEYESIDPGQ | 1 | 18 | - | - | - | - | - | - | 18 | - | - | - | - | - | - | - | - | - | - | - | - | - |
Y1621 | EVPARNLYAHIQKLG | 1 | 9 | - | - | - | - | - | - | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S1294 | KRTHSPSSKDEQSIG | - | - | - | - | - | - | - | - | - | - | - |
S1299 | PSSKDEQSIGLKDSL | - | - | - | - | - | - | - | - | - | - | - |
S1305 | QSIGLKDSLLAHSSD | 9.4e-4 | - | - | - | - | 9.4e-4 | - | - | - | - | - |
S1310 | KDSLLAHSSDPVEMR | -0.38 | - | - | - | - | - | - | - | -0.38 | - | - |
S1311 | DSLLAHSSDPVEMRR | - | - | - | - | - | - | - | - | - | - | - |
Y1356 | GLKFSQEYESIDPGQ | - | - | - | - | - | - | - | - | - | - | - |
Y1621 | EVPARNLYAHIQKLG | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |