LONP1: lon peptidase 1, mitochondrial
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2x36 chain A
2x36 chain B
2x36 chain C
2x36 chain D
2x36 chain E
2x36 chain F
6wys chain A
6wys chain B
6wys chain C
6wzv chain A
6wzv chain B
6wzv chain C
6x1m chain A
6x1m chain B
6x1m chain C
6x27 chain A
6x27 chain B
6x27 chain C
6x27 chain D
6x27 chain E
6x27 chain F
6x27 chain G
6x27 chain H
6x27 chain I
6x27 chain J
6x27 chain K
6x27 chain L
7krz chain A
7krz chain B
7krz chain C
7krz chain D
7krz chain E
7krz chain F
7ksl chain A
7ksl chain B
7ksl chain C
7ksl chain E
7ksl chain F
7ksm chain A
7ksm chain B
7ksm chain C
7ksm chain D
7ksm chain E
7ksm chain F
7nfy chain A
7nfy chain B
7nfy chain C
7nfy chain D
7nfy chain E
7nfy chain F
7ng4 chain A
7ng4 chain B
7ng4 chain C
7ng4 chain D
7ng4 chain E
7ng4 chain F
7ng5 chain A
7ng5 chain B
7ng5 chain C
7ng5 chain D
7ng5 chain E
7ng5 chain F
7ngc chain A
7ngc chain B
7ngc chain C
7ngc chain D
7ngc chain E
7ngc chain F
7ngf chain A
7ngf chain B
7ngf chain C
7ngf chain D
7ngf chain E
7ngf chain F
7ngl chain A
7ngl chain B
7ngl chain C
7ngl chain D
7ngl chain E
7ngl chain F
7ngp chain A
7ngp chain B
7ngp chain C
7ngp chain D
7ngp chain E
7ngp chain F
7ngq chain A
7ngq chain B
7ngq chain C
7ngq chain D
7ngq chain E
7ngq chain F
7oxo chain A
7oxo chain B
7oxo chain C
7oxo chain D
7oxo chain E
7oxo chain F
7p09 chain A
7p09 chain B
7p09 chain C
7p09 chain D
7p09 chain E
7p09 chain F
7p0b chain A
7p0b chain B
7p0b chain C
7p0b chain D
7p0b chain E
7p0b chain F
7p0m chain A
7p0m chain B
7p0m chain C
7p0m chain D
7p0m chain E
7p0m chain F
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S531 PPGVGKTS IARSIAR 1 8 - - - - - - - - - - - - - - 6 2 - - - - S535 GKTSIARS IARALNR 1 8 - - - - - - - - - - - - - - 6 2 - - - - S855 ATPKDGPS AGCTIVT 1 8 - - 4 4 - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S531 PPGVGKTS IARSIAR - - - - - - - - - - - S535 GKTSIARS IARALNR - - - - - - - - - - - S855 ATPKDGPS AGCTIVT - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S531
S535
S855
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S531 S535 S855 protein RNA SCNV methylation CCRCC S531 S535 S855 protein RNA SCNV methylation COAD S531 S535 S855 protein RNA SCNV methylation GBM S531 S535 S855 protein RNA SCNV methylation HNSCC S531 S535 S855 protein RNA SCNV methylation LSCC S531 S535 S855 protein RNA SCNV methylation LUAD S531 S535 S855 protein RNA SCNV methylation OV S531 S535 S855 protein RNA SCNV methylation PDAC S531 S535 S855 protein RNA SCNV methylation UCEC S531 S535 S855 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S531
S535
S855
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S531
S535
S855
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.