PPARD: peroxisome proliferator activated receptor delta
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1gwx chain A
1gwx chain B
1y0s chain A
1y0s chain B
2awh chain A
2awh chain B
2b50 chain A
2b50 chain B
2baw chain A
2baw chain B
2env chain A
2gwx chain A
2gwx chain B
2j14 chain A
2j14 chain B
2q5g chain A
2q5g chain B
2xyj chain A
2xyj chain B
2xyw chain A
2xyw chain B
2xyx chain A
2xyx chain B
2znp chain A
2znp chain B
2znq chain A
2znq chain B
3d5f chain A
3d5f chain B
3dy6 chain A
3dy6 chain B
3et2 chain A
3et2 chain B
3gwx chain A
3gwx chain B
3gz9 chain A
3oz0 chain A
3peq chain A
3peq chain B
3sp9 chain A
3sp9 chain B
3tkm chain A
5u3q chain A
5u3q chain B
5u3r chain A
5u3r chain B
5u3s chain A
5u3s chain B
5u3t chain A
5u3t chain B
5u3u chain A
5u3u chain B
5u3v chain A
5u3v chain B
5u3w chain A
5u3w chain B
5u3x chain A
5u3x chain B
5u3y chain A
5u3y chain B
5u3z chain A
5u3z chain B
5u40 chain A
5u40 chain B
5u41 chain A
5u41 chain B
5u42 chain A
5u42 chain B
5u43 chain A
5u43 chain B
5u44 chain A
5u44 chain B
5u45 chain A
5u45 chain B
5u46 chain A
5u46 chain B
5xmx chain A
5xmx chain B
5y7x chain A
5y7x chain B
5zxi chain A
5zxi chain B
6a6p chain A
6a6p chain B
7f80 chain A
7f80 chain B
7vwe chain A
7vwe chain B
7vwf chain A
7vwf chain B
7vwg chain A
7vwg chain B
7vwh chain A
7vwh chain B
7w0g chain A
7w0g chain B
7wgl chain A
7wgl chain B
7wgn chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S50 TDLSRSSS PPSLLDQ 6 448 54 - - - - - 17 - 52 29 49 45 90 82 - - - - 17 13 S53 SRSSSPPS LLDQLQM 1 9 9 - - - - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S50 TDLSRSSS PPSLLDQ -1.7e-3 - - - - -7.4e-4 -0.48 -0.17 - - - S53 SRSSSPPS LLDQLQM - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S50
S53
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S50 S53 protein RNA SCNV methylation CCRCC S50 S53 protein RNA SCNV methylation COAD S50 S53 protein RNA SCNV methylation GBM S50 S53 protein RNA SCNV methylation HNSCC S50 S53 protein RNA SCNV methylation LSCC S50 S53 protein RNA SCNV methylation LUAD S50 S53 protein RNA SCNV methylation OV S50 S53 protein RNA SCNV methylation PDAC S50 S53 protein RNA SCNV methylation UCEC S50 S53 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S50
S53
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S50
S53
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.