PNP: purine nucleoside phosphorylase
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1m73 chain E
1pf7 chain E
1pwy chain E
1rct chain E
1rfg chain E
1rr6 chain A
1rsz chain A
1rt9 chain A
1ula chain A
1ulb chain A
1v2h chain E
1v3q chain E
1v41 chain E
1v45 chain E
1yry chain E
2a0w chain A
2a0x chain A
2a0y chain A
2oc4 chain A
2oc9 chain A
2on6 chain A
2q7o chain E
3bgs chain A
3d1v chain A
3gb9 chain A
3gb9 chain B
3gb9 chain C
3ggs chain A
3ggs chain B
3ggs chain C
3iny chain A
3k8o chain E
3k8o chain Q
3k8o chain S
3k8o chain T
3k8o chain U
3k8o chain Y
3k8q chain A
3phb chain E
3phb chain Q
3phb chain S
3phb chain T
3phb chain U
3phb chain Y
4ear chain A
4ear chain B
4ear chain C
4eb8 chain A
4eb8 chain B
4eb8 chain C
4ece chain A
4ece chain B
4ece chain C
4ece chain D
4ece chain E
4ece chain F
4gka chain A
4gka chain B
4gka chain C
4gka chain D
4gka chain E
4gka chain F
5etj chain A
5etj chain B
5etj chain C
5etj chain D
5etj chain E
5etj chain F
5ugf chain A
5ugf chain B
5ugf chain C
5ugf chain D
5ugf chain E
5ugf chain F
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S19 NTAEWLLS HTKHRPQ 2 194 - - 91 76 - - 27 - - - - - - - - - - - - - S33 QVAIICGS GLGGLTD 9 1208 113 - 103 80 14 13 99 - 108 62 108 99 110 101 - - 100 43 41 14 S289 IPLPDKAS _______ 2 58 - - 26 23 - - - - - - - - - - - - - - 7 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S19 NTAEWLLS HTKHRPQ -2.8e-25 - -2.8e-25 - - - - - - - - S33 QVAIICGS GLGGLTD -5.9e-50 - -1.3e-11 - - -4e-9 -4.3e-30 -3.5e-27 - -0.067 0.78 S289 IPLPDKAS _______ -2.5e-4 - -2.5e-4 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S19
S33
S289
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S19 S33 S289 protein RNA SCNV methylation CCRCC S19 S33 S289 protein RNA SCNV methylation COAD S19 S33 S289 protein RNA SCNV methylation GBM S19 S33 S289 protein RNA SCNV methylation HNSCC S19 S33 S289 protein RNA SCNV methylation LSCC S19 S33 S289 protein RNA SCNV methylation LUAD S19 S33 S289 protein RNA SCNV methylation OV S19 S33 S289 protein RNA SCNV methylation PDAC S19 S33 S289 protein RNA SCNV methylation UCEC S19 S33 S289 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S19
S33
S289
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S19
S33
S289
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.