PSMB5: proteasome 20S subunit beta 5
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4r3o chain L
4r3o chain Z
4r67 chain 3
4r67 chain L
4r67 chain Z
4r67 chain n
5a0q chain L
5a0q chain Z
5gjq chain e
5gjq chain s
5gjr chain e
5gjr chain s
5l4g chain 5
5l4g chain Y
5l5w chain K
5l5w chain Y
5l5x chain K
5l5x chain Y
5l5y chain K
5l5y chain Y
5l5z chain K
5l5z chain Y
5l60 chain K
5l60 chain Y
5l61 chain K
5l61 chain Y
5l62 chain K
5l62 chain Y
5l63 chain K
5l63 chain Y
5l64 chain K
5l64 chain Y
5le5 chain K
5le5 chain Y
5lex chain K
5lex chain Y
5ley chain K
5ley chain Y
5lez chain K
5lez chain Y
5lf0 chain K
5lf0 chain Y
5lf1 chain K
5lf1 chain Y
5lf3 chain K
5lf3 chain Y
5lf4 chain K
5lf4 chain Y
5lf6 chain K
5lf6 chain Y
5lf7 chain K
5lf7 chain Y
5ln3 chain 5
5m32 chain K
5m32 chain Y
5t0c chain AR
5t0c chain BR
5t0g chain R
5t0h chain R
5t0i chain R
5t0j chain R
5vfo chain R
5vfo chain r
5vfp chain R
5vfp chain r
5vfq chain R
5vfq chain r
5vfr chain R
5vfr chain r
5vfs chain R
5vfs chain r
5vft chain R
5vft chain r
5vfu chain R
5vfu chain r
6kwy chain K
6kwy chain Y
6msb chain R
6msb chain r
6msd chain R
6msd chain r
6mse chain R
6mse chain r
6msg chain R
6msg chain r
6msh chain R
6msh chain r
6msj chain R
6msj chain r
6msk chain R
6msk chain r
6r70 chain K
6r70 chain Y
6rey chain L
6rey chain Z
6rgq chain L
6rgq chain Z
6wjd chain R
6wjd chain r
6wjn chain R
6wjn chain r
6xmj chain L
7lxv chain K
7lxv chain Y
7nht chain K
7pg9 chain L
7pg9 chain Z
7v5g chain E
7v5g chain L
7v5m chain L
7v5m chain Z
7w37 chain R
7w37 chain r
7w38 chain R
7w38 chain r
7w39 chain R
7w39 chain r
7w3a chain R
7w3a chain r
7w3b chain R
7w3b chain r
7w3c chain R
7w3c chain r
7w3f chain R
7w3f chain r
7w3g chain R
7w3g chain r
7w3h chain R
7w3h chain r
7w3i chain R
7w3i chain r
7w3j chain R
7w3j chain r
7w3k chain R
7w3k chain r
7w3m chain R
7w3m chain r
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
Loading, please wait
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S189 GATFSVGS GSVYAYG 1 10 - - - - - - - - - - 5 5 - - - - - - - - S247 EDGWIRVS SDNVADL 3 41 14 - - - - - 18 - - - - - - - 7 2 - - - - S248 DGWIRVSS DNVADLH 4 102 25 - 20 20 - - 9 - - - 15 13 - - - - - - - -
Tumor and normal comparison
Loading, please wait
Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S189 GATFSVGS GSVYAYG - - - - - - - - - - - S247 EDGWIRVS SDNVADL - - - - - - - - - - - S248 DGWIRVSS DNVADLH -0.028 - -0.028 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
Loading, please wait
all sites
S189
S247
S248
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S189 S247 S248 protein RNA SCNV methylation CCRCC S189 S247 S248 protein RNA SCNV methylation COAD S189 S247 S248 protein RNA SCNV methylation GBM S189 S247 S248 protein RNA SCNV methylation HNSCC S189 S247 S248 protein RNA SCNV methylation LSCC S189 S247 S248 protein RNA SCNV methylation LUAD S189 S247 S248 protein RNA SCNV methylation OV S189 S247 S248 protein RNA SCNV methylation PDAC S189 S247 S248 protein RNA SCNV methylation UCEC S189 S247 S248 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S189
S247
S248
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S189
S247
S248
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.