Protein: ENSP00000355968
Gene: SLC30A1

LinkedOmicsKB © 2022-2023 Zhang Lab

SLC30A1:
solute carrier family 30 member 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S167PKGPRVKSTRPGSSD530014-3423--90---2518------8016
T168KGPRVKSTRPGSSDI215------------54----6-
S172VKSTRPGSSDINVAP102179-12414219-136542221267237122
S173KSTRPGSSDINVAPG828325-4536--53-124151098--1343415
S197NTLVANTSNSNGLKL5116------18---5486--74559
S380HVWQLAGSRIIATAH19----------54--------
S426PEFASVGSKSSVVPC18------8-------------
S429ASVGSKSSVVPCELA476------9---55--71--3118
T449ALKQCCGTLPQAPSG6266--77--9---14124944--68301313
S455GTLPQAPSGKDAEKT443--88----53--44--74--
Showing 1 to 10 of 16 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S167PKGPRVKSTRPGSSD0.023-6.9e-4---5.2e-3----0.024
T168KGPRVKSTRPGSSDI-----------
S172VKSTRPGSSDINVAP9.4e-3------9.4e-3---
S173KSTRPGSSDINVAPG0.15-1.1e-3--------0.21
S197NTLVANTSNSNGLKL-----------
S380HVWQLAGSRIIATAH-----------
S426PEFASVGSKSSVVPC-----------
S429ASVGSKSSVVPCELA-0.32----------0.32
T449ALKQCCGTLPQAPSG-0.1-------2.3e-3-0.45-
S455GTLPQAPSGKDAEKT-----------
Showing 1 to 10 of 16 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationCCRCCS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationCOADS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationGBMS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationHNSCCS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationLSCCS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationLUADS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationOVS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationPDACS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylationUCECS167T168S172S173S197S380S426S429T449S455T462S466S468S473S505S506proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.