- PEX19:
- peroxisomal biogenesis factor 19
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S35 | DFDKAKPSPAPPSTT | 9 | 542 | 32 | - | 12 | 4 | - | - | 99 | - | 6 | 3 | 43 | 38 | 62 | 57 | 14 | 4 | 73 | 31 | 50 | 14 |
T41 | PSPAPPSTTTAPDAS | 1 | 8 | - | - | 4 | 4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
T43 | PAPPSTTTAPDASGP | 1 | 6 | 6 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S48 | TTTAPDASGPQKRSP | 1 | 8 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S54 | ASGPQKRSPGDTAKD | 4 | 130 | - | - | - | - | 6 | 3 | 81 | - | - | - | 5 | 5 | - | - | - | - | - | - | 30 | - |
S66 | AKDALFASQEKFFQE | 9 | 1124 | 122 | - | 86 | 64 | - | - | 90 | - | 85 | 50 | 88 | 80 | 89 | 79 | 43 | 9 | 100 | 40 | 84 | 15 |
S117 | EAAGRVGSDMTSQQE | 2 | 50 | - | - | 5 | 4 | - | - | - | - | - | - | - | - | 21 | 20 | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S35 | DFDKAKPSPAPPSTT | 0.072 | - | - | - | - | - | -7.5e-3 | 0.17 | - | 0.31 | 1.0e-4 |
T41 | PSPAPPSTTTAPDAS | - | - | - | - | - | - | - | - | - | - | - |
T43 | PAPPSTTTAPDASGP | - | - | - | - | - | - | - | - | - | - | - |
S48 | TTTAPDASGPQKRSP | - | - | - | - | - | - | - | - | - | - | - |
S54 | ASGPQKRSPGDTAKD | - | - | - | - | - | - | - | - | - | - | - |
S66 | AKDALFASQEKFFQE | -7.8e-4 | - | 2.8e-13 | - | - | 0.54 | -1.6e-3 | -4.9e-5 | - | -8.6e-10 | -5.3e-3 |
S117 | EAAGRVGSDMTSQQE | 0.083 | - | - | - | - | - | - | 0.083 | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
KINASE-PSP_CDK2 | S35 | 4.5e-19 | 7.1e-5 | 0.099 | - | -0.55 | - | 3.0e-4 | 0.15 | 2.2e-16 | 5.5e-5 | 3.5e-3 |
PERT-PSP_NOCODAZOLE | S35 | 6e-17 | 2.4e-3 | 5.3e-3 | - | 0.023 | - | 0.037 | 0.039 | 7.1e-4 | 1.6e-6 | 1.2e-3 |
KINASE-PSP_ERK2/MAPK1 | S35 | 2.2e-15 | 0.001 | 7.4e-3 | - | 3e-7 | - | 0.26 | 0.029 | 0.77 | 5.2e-7 | 6.1e-3 |
PERT-PSP_PHORBOL_ESTER | S66 | 1.8e-14 | - | - | - | 5.2e-3 | 8.6e-3 | 0.018 | 2.2e-5 | 2.7e-4 | 2.8e-4 | 0.34 |
KINASE-PSP_ERK1/MAPK3 | S35 | 2.6e-13 | 1.4e-3 | 0.026 | - | 5.8e-8 | - | 0.42 | 0.13 | 0.56 | 4.6e-8 | 0.14 |
PERT-PSP_ANTI_CD3 | S66 | 3e-13 | - | - | - | 1.5e-3 | 0.38 | 3.8e-3 | - | 7.9e-4 | 9.6e-8 | 0.026 |
KINASE-PSP_CDK1 | S35 | 5.6e-13 | 1.3e-3 | 0.067 | - | 0.12 | - | 0.048 | 0.36 | 2.7e-3 | 6.6e-6 | 6.9e-4 |
PERT-PSP_PHORBOL_ESTER | S35 | 3.2e-11 | - | - | - | 6.4e-10 | - | 0.33 | 5.9e-3 | 0.18 | 3.8e-7 | -0.95 |
KINASE-PSP_PKCA/PRKCA | S66 | 3.2e-11 | 0.036 | - | - | 2.5e-6 | 0.35 | 0.11 | 3.5e-5 | 0.24 | 7.7e-3 | 0.14 |
PERT-PSP_EGF | S66 | 2.7e-10 | 0.15 | 0.42 | - | 4.2e-3 | 0.078 | 0.6 | 2.6e-7 | 6.4e-3 | 0.034 | 0.12 |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |