LMNA:
lamin A/C

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T3_____METPSQRRAT18------------44------
S5___METPSQRRATRS3458---------1514--71----
T10TPSQRRATRSGAQAS731348-123----503310102624--18105415
S12SQRRATRSGAQASST929841-1919--9-7255171651101765816
S17TRSGAQASSTPLSPT623523-----18---282698338--6616
S18RSGAQASSTPLSPTR72079-44--45-44----7016423213
T19SGAQASSTPLSPTRI980188-8369--63-62361917716461146327604
S22QASSTPLSPTRITRL91290113-9572--99-108621089992858319100429518
T27PLSPTRITRLQEKED4107--44----2716--2321--84--
S51VYIDRVRSLETENAG980888-5846--9-65379889231983198034519
Showing 1 to 10 of 78 rows
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Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T3_____METPSQRRAT-----------
S5___METPSQRRATRS-----------
T10TPSQRRATRSGAQAS-4.4e-9-----3.2e-9--0.016---0.066
S12SQRRATRSGAQASST-2e-9--------1.3e-3--1.4e-7
S17TRSGAQASSTPLSPT-9.4e-7------0.015----6.8e-6
S18RSGAQASSTPLSPTR-0.48--------5.5e-4-0.014
T19SGAQASSTPLSPTRI0.98-0.15---6.2e-5-0.47-4.4e-33.5e-6-
S22QASSTPLSPTRITRL-1.7e-17-0.85---6.1e-13-2e-30-2e-7-4.4e-61.5e-80.94
T27PLSPTRITRLQEKED0.034----0.23-0.074---
S51VYIDRVRSLETENAG0.027-0.75--3.4e-5-6.3e-50.82-0.581.4e-7-
Showing 1 to 10 of 78 rows
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* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationCCRCCT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationCOADT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationGBMT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationHNSCCT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationLSCCT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationLUADT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationOVT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationPDACT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylationUCECT3S5T10S12S17S18T19S22T27S51T64S66S71S75S94S107S143S149T150S153T157S212T218S268S277S282S295S301S303S307S326S390S392T394S395S398S403S404S406S407T409S414S423T424S426S428S429S431S437S458S463T505S507S525S533T534S568S571S572S573Y579T585T590S599S601S603S612S613S615S616S618S619S628S632S636S651S652S657proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.