Protein: ENSP00000357644
Gene: GATAD2B

LinkedOmicsKB © 2022-2023 Zhang Lab

GATAD2B:
GATA zinc finger domain containing 2B

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S17RLNLLKRSLDPADER617014-----26---24231413267--1112
T120EPERGRLTPSPDIIV1093361-21205499-955574684541831892399518
S122ERGRLTPSPDIIVLS10929122-42407281-312110394898168162410899
S129SPDIIVLSDNEASSP101217122-8162575190-935394879889471252248718
S134VLSDNEASSPRSSSR983488-81681628--8952645871651867931119
S135LSDNEASSPRSSSRM10126546-3532767799-10358103911101006316105448918
S138NEASSPRSSSRMEER117------------------512
S140ASSPRSSSRMEERLK6445----626236-1183533--77187429--
T200KENVVQKTPVVQNAA132------------------1814
S213AASIVQPSPAHVGQQ614740-------635487376--292
Showing 1 to 10 of 24 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S17RLNLLKRSLDPADER-1.7e-5------1.7e-5----
T120EPERGRLTPSPDIIV0.57-4.6e-3---3.1e-70.49-0.614.6e-5-0.390.7
S122ERGRLTPSPDIIVLS-0.062--0.47---0.340.023-9.2e-4-2.4e-30.24-
S129SPDIIVLSDNEASSP-0.7-0.960.44--0.360.160.85-0.47-0.0510.94
S134VLSDNEASSPRSSSR-5.6e-4--4.7e-7---0.128.9e-30.56--1.4e-5-
S135LSDNEASSPRSSSRM1.4e-6--0.30.024-0.111.9e-74.3e-8-0.11-0.940.063
S138NEASSPRSSSRMEER-----------
S140ASSPRSSSRMEERLK-0.84--0.26---0.41-0.14-0.029-
T200KENVVQKTPVVQNAA-----------
S213AASIVQPSPAHVGQQ-----------
Showing 1 to 10 of 24 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationCCRCCS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationCOADS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationGBMS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationHNSCCS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationLSCCS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationLUADS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationOVS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationPDACS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylationUCECS17T120S122S129S134S135S138S140T200S213S227S246T289S334S338S340T343S348S486T488T489S517S586S588proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.