- PSMD4:
- proteasome 26S subunit, non-ATPase 4
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S43 | VCHSKTRSNPENNVG | 1 | 8 | - | - | 4 | 4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S242 | ARRAAAASAAEAGIA | 4 | 41 | 16 | - | 4 | 4 | - | - | - | - | 5 | 3 | 5 | 4 | - | - | - | - | - | - | - | - |
T250 | AAEAGIATTGTEDSD | 2 | 14 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3 | 2 | - | - |
T251 | AEAGIATTGTEDSDD | 2 | 24 | 15 | - | 5 | 4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
T253 | AGIATTGTEDSDDAL | 4 | 34 | - | - | - | - | - | - | - | - | 6 | 4 | 5 | 5 | - | - | - | - | 3 | 2 | 7 | 2 |
S256 | ATTGTEDSDDALLKM | 8 | 316 | 8 | - | - | - | - | - | 63 | - | 6 | 3 | 15 | 15 | 24 | 21 | 13 | 2 | 28 | 11 | 89 | 18 |
T264 | DDALLKMTISQQEFG | 4 | 41 | 8 | - | 4 | 4 | - | - | - | - | - | - | 10 | 9 | - | - | - | - | 4 | 2 | - | - |
S266 | ALLKMTISQQEFGRT | 9 | 1425 | 122 | - | 99 | 76 | 87 | 92 | 99 | - | 108 | 62 | 108 | 99 | 110 | 101 | - | - | 105 | 44 | 95 | 18 |
S358 | AIRNAMGSLASQATK | 3 | 58 | 18 | - | - | - | - | - | - | - | - | - | 5 | 5 | - | - | - | - | - | - | 24 | 6 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S43 | VCHSKTRSNPENNVG | - | - | - | - | - | - | - | - | - | - | - |
S242 | ARRAAAASAAEAGIA | - | - | - | - | - | - | - | - | - | - | - |
T250 | AAEAGIATTGTEDSD | - | - | - | - | - | - | - | - | - | - | - |
T251 | AEAGIATTGTEDSDD | - | - | - | - | - | - | - | - | - | - | - |
T253 | AGIATTGTEDSDDAL | - | - | - | - | - | - | - | - | - | - | - |
S256 | ATTGTEDSDDALLKM | 6.9e-4 | - | - | - | - | - | - | 4.3e-4 | - | 0.067 | 0.6 |
T264 | DDALLKMTISQQEFG | - | - | - | - | - | - | - | - | - | - | - |
S266 | ALLKMTISQQEFGRT | 4.1e-42 | - | -1.9e-3 | 1.2e-16 | - | 4.4e-18 | 1.8e-21 | 9.2e-9 | - | 3.1e-10 | 0.56 |
S358 | AIRNAMGSLASQATK | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |