Protein: ENSP00000360202
Gene: STAG2

LinkedOmicsKB © 2022-2023 Zhang Lab

STAG2:
stromal antigen 2

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T1056LAGGDDDTMSVISGI110----------55--------
S1058GGDDDTMSVISGISS946548-3222433818-5235311512--9338294
S1061DDTMSVISGISSRGS101375103-6552959399-96541039510697601691379518
S1064MSVISGISSRGSTVR1079064-2523161162-48258876857749101878818
S1065SVISGISSRGSTVRS715922-8-----1895489--83569
S1068SGISSRGSTVRSKKS436--------63--54--7353
T1109MWLSREQTLHTPVMM223--------------71--114
T1112SREQTLHTPVMMQTP101545114-103809710099-10862108991101018319105449518
T1118HTPVMMQTPQLTSTI3579---------------52347
T1160LDYNRRGTSLMEDDE227----------------42192
Showing 1 to 10 of 13 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T1056LAGGDDDTMSVISGI-----------
S1058GGDDDTMSVISGISS-0.005-0.22-4.8e-5---0.76---0.014-
S1061DDTMSVISGISSRGS1.2e-8-0.077-2.1e-3-6.5e-42.4e-109.5e-7-0.11.0e-40.6
S1064MSVISGISSRGSTVR5.6e-5-0.68---0.142.5e-121.3e-7-0.032-0.41
S1065SVISGISSRGSTVRS-----------
S1068SGISSRGSTVRSKKS-----------
T1109MWLSREQTLHTPVMM-----------
T1112SREQTLHTPVMMQTP9.6e-11-2.8e-3-0.25-0.222.6e-171.3e-190.6-0.12-0.22
T1118HTPVMMQTPQLTSTI-----------
T1160LDYNRRGTSLMEDDE-----------
Showing 1 to 10 of 13 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationCCRCCT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationCOADT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationGBMT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationHNSCCT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationLSCCT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationLUADT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationOVT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationPDACT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylationUCECT1056S1058S1061S1064S1065S1068T1109T1112T1118T1160S1161S1177S1178proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.