CACNA1B: calcium voltage-gated channel subunit alpha1 B
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2lcm chain A
7mix chain A
7miy chain A
7vfs chain A
7vfu chain A
7vfv chain A
7vfw chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S411 DRNAEEKS PLDVLKR 1 61 - - - - - - 61 - - - - - - - - - - - - - S424 KRAATKKS RNDLIHA 1 27 - - - - - - 27 - - - - - - - - - - - - - S446 ADLCAVGS PFARASL 1 9 - - - - - - 9 - - - - - - - - - - - - - S745 AKEVAEVS PMSAANI 1 90 - - - - - - 90 - - - - - - - - - - - - - S748 VAEVSPMS AANISIA 1 10 - - - - - - 10 - - - - - - - - - - - - - S783 RLQNLRAS CEALYSE 1 99 - - - - - - 99 - - - - - - - - - - - - - S876 AEAPKAES GEPGARE 1 17 - - - - - - 17 - - - - - - - - - - - - - S893 PRPHRSHS KEAAGPP 1 26 - - - - 9 17 - - - - - - - - - - - - - - S923 RRHHRRGS PEEAAER 5 335 - - - - 65 78 99 - - - 43 36 5 4 4 1 - - - - S971 AGPREAES GEEPARR 1 8 - - - - - - 8 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S411 DRNAEEKS PLDVLKR - - - - - - - - - - - S424 KRAATKKS RNDLIHA - - - - - - - - - - - S446 ADLCAVGS PFARASL - - - - - - - - - - - S745 AKEVAEVS PMSAANI - - - - - - - - - - - S748 VAEVSPMS AANISIA - - - - - - - - - - - S783 RLQNLRAS CEALYSE - - - - - - - - - - - S876 AEAPKAES GEPGARE - - - - - - - - - - - S893 PRPHRSHS KEAAGPP - - - - - - - - - - - S923 RRHHRRGS PEEAAER -0.27 - - -3.6e-21 - - 3e-15 - - - - S971 AGPREAES GEEPARR - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S411
S424
S446
S745
S748
S783
S876
S893
S923
S971
S1745
S1757
S1916
S1919
S1938
S1960
S2016
S2023
S2209
S2233
S2256
S2266
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation CCRCC S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation COAD S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation GBM S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation HNSCC S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation LSCC S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation LUAD S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation OV S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation PDAC S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation UCEC S411 S424 S446 S745 S748 S783 S876 S893 S923 S971 S1745 S1757 S1916 S1919 S1938 S1960 S2016 S2023 S2209 S2233 S2256 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S411
S424
S446
S745
S748
S783
S876
S893
S923
S971
S1745
S1757
S1916
S1919
S1938
S1960
S2016
S2023
S2209
S2233
S2256
S2266
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S411
S424
S446
S745
S748
S783
S876
S893
S923
S971
S1745
S1757
S1916
S1919
S1938
S1960
S2016
S2023
S2209
S2233
S2256
S2266
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.