MMP9: matrix metallopeptidase 9
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1gkc chain A
1gkc chain B
1gkd chain A
1gkd chain B
1itv chain A
1itv chain B
1l6j chain A
2ovx chain A
2ovx chain B
2ovz chain A
2ovz chain B
2ow0 chain A
2ow0 chain B
2ow1 chain A
2ow1 chain B
2ow2 chain A
2ow2 chain B
4h1q chain A
4h1q chain B
4h2e chain A
4h2e chain B
4h3x chain A
4h3x chain B
4h82 chain A
4h82 chain B
4h82 chain C
4h82 chain D
4hma chain A
4hma chain B
4jij chain A
4jij chain B
4jqg chain A
4jqg chain B
4wzv chain A
4wzv chain B
4xct chain A
5cuh chain A
5cuh chain B
5i12 chain A
5th6 chain A
5th6 chain B
5th6 chain C
5th6 chain D
5th9 chain A
5th9 chain B
5th9 chain C
5ue3 chain A
5ue3 chain B
5ue4 chain A
5ue4 chain B
6esm chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S79 LLLQKQLS LPETGEL 2 17 - - - - - - - - 7 3 - - - - - - - - 5 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S79 LLLQKQLS LPETGEL - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S79
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S79 protein RNA SCNV methylation CCRCC S79 protein RNA SCNV methylation COAD S79 protein RNA SCNV methylation GBM S79 protein RNA SCNV methylation HNSCC S79 protein RNA SCNV methylation LSCC S79 protein RNA SCNV methylation LUAD S79 protein RNA SCNV methylation OV S79 protein RNA SCNV methylation PDAC S79 protein RNA SCNV methylation UCEC S79 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S79
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S79
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.