Protein: ENSP00000362550
Gene: CMTR1

LinkedOmicsKB © 2022-2023 Zhang Lab

CMTR1:
cap methyltransferase 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S28AELALSLSSTSDDEP19------9-------------
T30LALSLSSTSDDEPPS2279-------126----------
S31ALSLSSTSDDEPPSS826815---5490-503118174371--1211
S49GAKASTTSLSGSDSE723347---9927---444044--2311132
S51KASTTSLSGSDSETE1067732-44686618-653474682219629441537
S53STTSLSGSDSETEGK101208105-7058828899-824674678477681478326618
S55TSLSGSDSETEGKQH1033614-1616171917-5350451312296195482
S63ETEGKQHSSDSFDDA6918-44--9---2423----21115
S64TEGKQHSSDSFDDAF6161--1312--26---343188--104114
S66GKQHSSDSFDDAFKA1072048-44171890-10862585372634811214516
Showing 1 to 10 of 13 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S28AELALSLSSTSDDEP-----------
T30LALSLSSTSDDEPPS-----------
S31ALSLSSTSDDEPPSS-0.011-----0.011-----
S49GAKASTTSLSGSDSE1.3e-3-----3.8e-15---9.1e-4-
S51KASTTSLSGSDSETE8.2e-14--1.8e-8-3.3e-62.3e-171.4e-3--1.5e-7-
S53STTSLSGSDSETEGK1.6e-15--2.6e-32.5e-15-0.0031.4e-162.4e-12-0.49-0.140.11
S55TSLSGSDSETEGKQH2.1e-3-----2.1e-3----
S63ETEGKQHSSDSFDDA9.2e-4-----9.2e-4----
S64TEGKQHSSDSFDDAF6.4e-4-----6.4e-4----
S66GKQHSSDSFDDAFKA2.7e-4----2.3e-100.230.033-0.67--0.27
Showing 1 to 10 of 13 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationCCRCCS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationCOADS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationGBMS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationHNSCCS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationLSCCS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationLUADS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationOVS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationPDACS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylationUCECS28T30S31S49S51S53S55S63S64S66S121S656T780proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.