CISD1: CDGSH iron sulfur domain 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2qd0 chain A
2qd0 chain B
2qh7 chain A
2qh7 chain B
2r13 chain A
3ew0 chain A
3ew0 chain B
3lpq chain A
3lpq chain B
3ree chain A
4ezf chain A
4ezf chain B
4f1e chain A
4f1e chain B
4f1e chain C
4f1e chain D
4f1e chain E
4f1e chain F
4f1e chain G
4f1e chain H
4f1e chain I
4f1e chain J
4f1e chain K
4f1e chain L
4f1e chain M
4f1e chain N
4f1e chain O
4f1e chain P
4f1e chain Q
4f1e chain R
4f28 chain A
4f28 chain B
4f2c chain A
4f2c chain B
6de9 chain A
7p0o chain A
7p0o chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T88 PFCDGAHT KHNEETG 3 221 - - 65 47 - - 99 - 6 4 - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T88 PFCDGAHT KHNEETG -1.4e-17 - -1.4e-17 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T88
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T88 protein RNA SCNV methylation CCRCC T88 protein RNA SCNV methylation COAD T88 protein RNA SCNV methylation GBM T88 protein RNA SCNV methylation HNSCC T88 protein RNA SCNV methylation LSCC T88 protein RNA SCNV methylation LUAD T88 protein RNA SCNV methylation OV T88 protein RNA SCNV methylation PDAC T88 protein RNA SCNV methylation UCEC T88 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T88
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T88
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.