TGFBR1: transforming growth factor beta receptor 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1b6c chain B
1b6c chain D
1b6c chain F
1b6c chain H
1ias chain A
1ias chain B
1ias chain C
1ias chain D
1ias chain E
1py5 chain A
1rw8 chain A
1vjy chain A
2l5s chain A
2pjy chain C
2wot chain A
2wou chain A
2x7o chain A
2x7o chain B
2x7o chain C
2x7o chain D
2x7o chain E
3faa chain A
3faa chain B
3faa chain C
3faa chain D
3faa chain E
3gxl chain A
3hmm chain A
3kcf chain A
3kcf chain B
3kcf chain C
3kcf chain D
3kcf chain E
3kfd chain I
3kfd chain J
3kfd chain K
3kfd chain L
3tzm chain A
4x0m chain A
4x2f chain A
4x2g chain A
4x2j chain A
4x2k chain A
4x2n chain A
5e8s chain A
5e8t chain A
5e8u chain A
5e8w chain A
5e8x chain A
5e8z chain A
5e90 chain A
5fri chain A
5qik chain A
5qil chain A
5qim chain A
5qtz chain A
5qu0 chain A
5usq chain A
6b8y chain A
6mac chain K
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S165 VPNEEDPS LDRPFIS 10 769 45 - 23 15 19 17 81 - 91 53 83 77 66 60 34 7 18 7 55 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S165 VPNEEDPS LDRPFIS 0.016 - 4.6e-5 - - 5.8e-3 0.037 -1.0e-5 - - 0.37
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S165
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S165 protein RNA SCNV methylation CCRCC S165 protein RNA SCNV methylation COAD S165 protein RNA SCNV methylation GBM S165 protein RNA SCNV methylation HNSCC S165 protein RNA SCNV methylation LSCC S165 protein RNA SCNV methylation LUAD S165 protein RNA SCNV methylation OV S165 protein RNA SCNV methylation PDAC S165 protein RNA SCNV methylation UCEC S165 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S165
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S165
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.