Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1gos chain A
1gos chain B
1oj9 chain A
1oj9 chain B
1oja chain A
1oja chain B
1ojc chain A
1ojc chain B
1ojd chain A
1ojd chain B
1ojd chain C
1ojd chain D
1ojd chain E
1ojd chain F
1ojd chain G
1ojd chain H
1ojd chain I
1ojd chain L
1s2q chain A
1s2q chain B
1s2y chain A
1s2y chain B
1s3b chain A
1s3b chain B
1s3e chain A
1s3e chain B
2bk3 chain A
2bk3 chain B
2bk4 chain A
2bk4 chain B
2bk5 chain A
2bk5 chain B
2byb chain A
2byb chain B
2c64 chain A
2c64 chain B
2c65 chain A
2c65 chain B
2c66 chain A
2c66 chain B
2c67 chain A
2c67 chain B
2c70 chain A
2c70 chain B
2c72 chain A
2c72 chain B
2c73 chain A
2c73 chain B
2c75 chain A
2c75 chain B
2c76 chain A
2c76 chain B
2v60 chain A
2v60 chain B
2v61 chain A
2v61 chain B
2vrl chain A
2vrl chain B
2vrm chain A
2vrm chain B
2vz2 chain A
2vz2 chain B
2xcg chain A
2xcg chain B
2xfn chain A
2xfn chain B
2xfo chain A
2xfo chain B
2xfp chain A
2xfp chain B
2xfq chain A
2xfq chain B
2xfu chain A
2xfu chain B
3po7 chain A
3po7 chain B
3zyx chain A
3zyx chain B
4a79 chain A
4a79 chain B
4a7a chain A
4a7a chain B
4crt chain A
4crt chain B
5mrl chain A
5mrl chain B
6fvz chain A
6fvz chain B
6fw0 chain A
6fw0 chain B
6fwc chain A
6fwc chain B
6rkb chain A
6rkb chain B
6rkp chain A
6rkp chain B
6rle chain A
6rle chain B
6yt2 chain A
6yt2 chain B
7b0v chain A
7b0v chain B
7b0z chain A
7b0z chain B
7p4f chain A
7p4f chain B
7p4h chain A
7p4h chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S131 DMGREIPS DAPWKAP 2 193 - - 65 47 - - 81 - - - - - - - - - - - - - S374 LYAKVLGS LEALEPV 4 144 - - 28 20 - - 81 - 5 4 - - - - - - - - 6 - S465 PEDEIWQS EPESVDV 8 527 26 - 63 46 59 66 68 - 23 14 - - 17 16 - - 49 18 44 18 S469 IWQSEPES VDVPAQP 5 59 9 - 8 8 - - - - 6 3 10 8 - - - - - - 5 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S131 DMGREIPS DAPWKAP -6.6e-8 - -6.6e-8 - - - - - - - - S374 LYAKVLGS LEALEPV -0.015 - -0.015 - - - - - - - - S465 PEDEIWQS EPESVDV -9.7e-14 - -1.5e-5 -2.7e-13 - -1.6e-5 - - - 0.7 -0.28 S469 IWQSEPES VDVPAQP - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S131
S374
S465
S469
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S131 S374 S465 S469 protein RNA SCNV methylation CCRCC S131 S374 S465 S469 protein RNA SCNV methylation COAD S131 S374 S465 S469 protein RNA SCNV methylation GBM S131 S374 S465 S469 protein RNA SCNV methylation HNSCC S131 S374 S465 S469 protein RNA SCNV methylation LSCC S131 S374 S465 S469 protein RNA SCNV methylation LUAD S131 S374 S465 S469 protein RNA SCNV methylation OV S131 S374 S465 S469 protein RNA SCNV methylation PDAC S131 S374 S465 S469 protein RNA SCNV methylation UCEC S131 S374 S465 S469 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S131
S374
S465
S469
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S131
S374
S465
S469
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.