Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1cok chain A
1dxs chain A
2kby chain A
2kby chain B
2kby chain C
2kby chain D
2mps chain B
2nb1 chain B
2nb1 chain D
2wqi chain A
2wqi chain B
2wqi chain C
2wqi chain D
2wqj chain 1
2wqj chain 2
2wqj chain A
2wqj chain B
2wqj chain C
2wqj chain D
2wqj chain E
2wqj chain F
2wqj chain G
2wqj chain H
2wqj chain I
2wqj chain J
2wqj chain K
2wqj chain L
2wqj chain M
2wqj chain N
2wqj chain O
2wqj chain P
2wqj chain Q
2wqj chain R
2wqj chain S
2wqj chain T
2wqj chain U
2wqj chain V
2wqj chain W
2wqj chain X
2wqj chain Y
2wqj chain Z
2wtt chain A
2wtt chain B
2wtt chain C
2wtt chain D
2wtt chain E
2wtt chain F
2wtt chain G
2wtt chain H
2wtt chain I
2wtt chain J
2wtt chain K
2wtt chain L
2wtt chain M
2wtt chain N
2wtt chain O
2wtt chain P
2xwc chain A
3vd0 chain A
3vd0 chain B
3vd0 chain C
3vd0 chain D
3vd0 chain I
3vd0 chain J
3vd0 chain K
3vd0 chain L
3vd1 chain A
3vd1 chain B
3vd1 chain C
3vd1 chain D
3vd1 chain I
3vd1 chain J
3vd1 chain K
3vd1 chain L
3vd2 chain A
3vd2 chain B
3vd2 chain C
3vd2 chain D
3vd2 chain I
3vd2 chain J
4a63 chain A
4a63 chain C
4a63 chain E
4a63 chain G
4a63 chain I
4a63 chain K
4g82 chain A
4g82 chain B
4g83 chain A
4g83 chain B
4guo chain A
4guo chain B
4guo chain C
4guo chain D
4guo chain I
4guo chain J
4guo chain K
4guo chain L
4guq chain A
4guq chain B
5hob chain A
5hob chain B
5hob chain C
5hob chain D
5hob chain E
5hob chain F
5hob chain G
5hob chain H
5hoc chain A
5hoc chain B
5kbd chain A
5kbd chain B
6fgs chain A
6ijq chain A
7ezj chain A
7ezj chain B
7ezj chain C
7ezj chain D
7ezj chain I
7ezj chain J
7ezj chain K
7ezj chain L
7ezj chain a
7ezj chain b
7ezj chain c
7ezj chain d
7ezj chain i
7ezj chain j
7ezj chain k
7ezj chain l
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S333 SKRAFKQS PPAVPAL 2 302 - - - - - - - - 108 62 68 64 - - - - - - - - S412 PSYGPVLS PMNKVHG 1 9 - - - - - - - - 6 3 - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S333 SKRAFKQS PPAVPAL 6.3e-16 - - - - 1.4e-4 2.4e-14 - - - - S412 PSYGPVLS PMNKVHG - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S333
S412
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S333 S412 protein RNA SCNV methylation CCRCC S333 S412 protein RNA SCNV methylation COAD S333 S412 protein RNA SCNV methylation GBM S333 S412 protein RNA SCNV methylation HNSCC S333 S412 protein RNA SCNV methylation LSCC S333 S412 protein RNA SCNV methylation LUAD S333 S412 protein RNA SCNV methylation OV S333 S412 protein RNA SCNV methylation PDAC S333 S412 protein RNA SCNV methylation UCEC S333 S412 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S333
S412
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S333
S412
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.