Protein: ENSP00000367629
Gene: ARHGEF16

LinkedOmicsKB © 2022-2023 Zhang Lab

ARHGEF16:
Rho guanine nucleotide exchange factor 16

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S6__MAQRHSDSSLEEK979117-65478189--533129274740831860275918
S9AQRHSDSSLEEKLLG71479-44117--17112020--284--12-
S41GLPMVRGSPRVRDDA33317---------54------7-
S74EPWPIVLSTESPAAL16------------------6-
S107KTPARHQSFGAAVLS101244106-70659710036-654288807973771795419518
S129PKLLPAPSFSLDDMD870815-86646263--955629264541--6226299
S131LLPAPSFSLDDMDVD5136--513536----5544----1112
S174QGDAIQLSPKLQALA91385122-103809395--9756108991101014613105449518
T189EEPSQPHTRSPAKNK18------------------8-
S191PSQPHTRSPAKNKKT5102----1088-1810------51402
Showing 1 to 10 of 20 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S6__MAQRHSDSSLEEK1.1e-3-1.1e-9-0.37--5.3e-30.431.2e-40.01-0.150.28
S9AQRHSDSSLEEKLLG-0.88------0.88----
S41GLPMVRGSPRVRDDA-----------
S74EPWPIVLSTESPAAL-----------
S107KTPARHQSFGAAVLS3.9e-26-1.1e-15-5.8e-3--0.532.2e-128e-130.212.1e-140.027
S129PKLLPAPSFSLDDMD-0.7-3.2e-5-9.6e-10--9.8e-50.0291.7e-6--0.88-
S131LLPAPSFSLDDMDVD5.2e-4-5.2e-4--------
S174QGDAIQLSPKLQALA3.6e-44-1.1e-230.038--0.067.8e-203.3e-210.0391.9e-83.1e-3
T189EEPSQPHTRSPAKNK-----------
S191PSQPHTRSPAKNKKT-----------
Showing 1 to 10 of 20 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationCCRCCS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationCOADS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationGBMS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationHNSCCS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationLSCCS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationLUADS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationOVS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationPDACS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylationUCECS6S9S41S74S107S129S131S174T189S191S208T226S227S230S238S239S240S576S577S578proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.