PCNA: proliferating cell nuclear antigen
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1axc chain A
1axc chain C
1axc chain E
1u76 chain A
1u76 chain C
1u76 chain E
1u7b chain A
1ul1 chain A
1ul1 chain B
1ul1 chain C
1vyj chain A
1vyj chain C
1vyj chain E
1vyj chain G
1vyj chain I
1vyj chain K
1vym chain A
1vym chain B
1vym chain C
1w60 chain A
1w60 chain B
2zvk chain A
2zvk chain B
2zvk chain C
2zvl chain A
2zvl chain B
2zvl chain C
2zvl chain D
2zvl chain E
2zvl chain F
2zvm chain A
2zvm chain B
2zvm chain C
3ja9 chain A
3ja9 chain B
3ja9 chain C
3p87 chain A
3p87 chain B
3p87 chain C
3p87 chain D
3p87 chain E
3p87 chain F
3tbl chain A
3tbl chain B
3tbl chain C
3vkx chain A
3wgw chain A
3wgw chain B
4d2g chain A
4d2g chain B
4d2g chain C
4rjf chain A
4rjf chain C
4rjf chain E
4ztd chain A
4ztd chain B
4ztd chain C
5e0t chain A
5e0t chain B
5e0t chain C
5e0u chain A
5e0u chain B
5e0u chain C
5e0v chain A
5e0v chain B
5iy4 chain A
5iy4 chain C
5iy4 chain E
5mav chain A
5mav chain B
5mav chain C
5mav chain D
5mav chain E
5mav chain F
5mlo chain A
5mlo chain C
5mlo chain E
5mlw chain A
5mlw chain C
5mlw chain E
5mom chain A
5mom chain B
5mom chain C
5yco chain A
5yco chain B
5yco chain C
5yco chain D
5yd8 chain X
5yd8 chain Y
5yd8 chain Z
6cbi chain A
6cbi chain B
6cbi chain C
6cbi chain D
6cbi chain E
6cbi chain F
6eht chain A
6eht chain B
6eht chain C
6fcm chain A
6fcm chain C
6fcm chain E
6fcn chain A
6fcn chain C
6fcn chain E
6gis chain A
6gis chain B
6gis chain C
6gws chain A
6gws chain B
6gws chain C
6hvo chain A
6hvo chain B
6hvo chain C
6k3a chain A
6k3a chain C
6k3a chain E
6qc0 chain A
6qc0 chain C
6qc0 chain E
6qcg chain A
6qcg chain B
6qcg chain C
6qcg chain D
6qcg chain E
6qcg chain F
6s1m chain E
6s1m chain F
6s1m chain G
6s1n chain E
6s1n chain F
6s1n chain G
6s1o chain E
6s1o chain F
6s1o chain G
6tny chain E
6tny chain F
6tny chain G
6tnz chain E
6tnz chain F
6tnz chain G
6vvo chain F
6vvo chain G
6vvo chain H
7efa chain A
7kq0 chain A
7kq0 chain C
7kq0 chain E
7kq1 chain A
7kq1 chain C
7kq1 chain E
7m5l chain A
7m5l chain B
7m5l chain C
7m5m chain A
7m5m chain B
7m5m chain C
7m5n chain A
7m5n chain B
7m5n chain C
7nv0 chain B
7nv0 chain C
7nv0 chain D
7nv1 chain B
7nv1 chain C
7nv1 chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S261 KIEDEEGS _______ 1 8 8 - - - - - - - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S261 KIEDEEGS _______ - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S261
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S261 protein RNA SCNV methylation CCRCC S261 protein RNA SCNV methylation COAD S261 protein RNA SCNV methylation GBM S261 protein RNA SCNV methylation HNSCC S261 protein RNA SCNV methylation LSCC S261 protein RNA SCNV methylation LUAD S261 protein RNA SCNV methylation OV S261 protein RNA SCNV methylation PDAC S261 protein RNA SCNV methylation UCEC S261 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S261
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S261
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.