Protein: ENSP00000368856
Gene: NFX1

LinkedOmicsKB © 2022-2023 Zhang Lab

NFX1:
nuclear transcription factor, X-box binding 1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S28IPQEKKNSGLNCGTQ214------9---------41--
S50IGRRNYSSPPPCHLS5596------99-935169646759----7618
S82PSGSKPKSQQTSFQS16------------------6-
S86KPKSQQTSFQSSPCN593--88--9-126--1512----185
S89SQQTSFQSSPCNKSP3112--------128--4442----6-
S90QQTSFQSSPCNKSPK7216--44--9-2213302954--2610537
S123IRVKKAQSLAEQTSD6370--1212--90-22131095448----8416
S142ESSTRSESGTDLREH7270--1312--18-6470633128--83113
T144STRSESGTDLREHSP332----------55----52132
S150GTDLREHSPSESEKE71131--10380--99-1086210899110100--105449518
Showing 1 to 10 of 19 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S28IPQEKKNSGLNCGTQ-----------
S50IGRRNYSSPPPCHLS4.7e-18----3.1e-64.7e-53.2e-8--2.2e-3
S82PSGSKPKSQQTSFQS-----------
S86KPKSQQTSFQSSPCN-----------
S89SQQTSFQSSPCNKSP9.3e-14------9.3e-14---
S90QQTSFQSSPCNKSPK1.2e-7----3.4e-51.2e-10---0.15-
S123IRVKKAQSLAEQTSD0.16----0.47-0.48--0.3
S142ESSTRSESGTDLREH9e-23-----2.1e-152.6e-9---
T144STRSESGTDLREHSP-----------
S150GTDLREHSPSESEKE-0.019--0.016---0.084.7e-33.4e-8--7.7e-16-0.062
Showing 1 to 10 of 19 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationCCRCCS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationCOADS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationGBMS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationHNSCCS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationLSCCS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationLUADS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationOVS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationPDACS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylationUCECS28S50S82S86S89S90S123S142T144S150S152S154S293S297S326S346S634S967S1095proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.