Protein: ENSP00000369915
Gene: NAP1L4

LinkedOmicsKB © 2022-2023 Zhang Lab

NAP1L4:
nucleosome assembly protein 1 like 4

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T28ASNTEKLTDQVMQNP116------------88------
T51RLDNVPHTPSSYIET961018-54757799-64--4466129339959
S53DNVPHTPSSYIETLP199-------------------
S54NVPHTPSSYIETLPK7210----333049---10945152145322
Y55VPHTPSSYIETLPKA1044249-4132201655-1062928494371513614
T58TPSSYIETLPKAVKR227------9-------144----
T111DKRREFITGDVEPTD411127-3727------------32132
T117ITGDVEPTDAESEWH443--44108--64------52--
S121VEPTDAESEWHSENE1070097-7654212327-72424442595127536186-
S125DAESEWHSENEEEEK10124961-45349710099-10862948560527518103439518
Showing 1 to 10 of 14 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T28ASNTEKLTDQVMQNP-----------
T51RLDNVPHTPSSYIET4.2e-3--4.1e-9----0.29-0.048-
S53DNVPHTPSSYIETLP-----------
S54NVPHTPSSYIETLPK0.002--0.002-------
Y55VPHTPSSYIETLPKA0.2-1.7e-3-0.58---0.610.49--0.89
T58TPSSYIETLPKAVKR-----------
T111DKRREFITGDVEPTD-3.0e-5--3.0e-5--------
T117ITGDVEPTDAESEWH-----------
S121VEPTDAESEWHSENE-0.06--6.8e-4-0.012--0.450.272.1e-3--0.035-
S125DAESEWHSENEEEEK-0.4-2.3e-30.087-0.0370.004-3.9e-51.8e-3-1.1e-7-0.31
Showing 1 to 10 of 14 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationCCRCCT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationCOADT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationGBMT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationHNSCCT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationLSCCT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationLUADT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationOVT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationPDACT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylationUCECT28T51S53S54Y55T58T111T117S121S125S139S288S304S309proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.