- HMGN1:
- high mobility group nucleosome binding domain 1
Lollipop plot
Phosphosites location and occurrence
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S7 | _MPKRKVSSAEGAAK | 10 | 1432 | 73 | - | 103 | 80 | 81 | 89 | 99 | - | 108 | 62 | 98 | 90 | 110 | 101 | 61 | 15 | 105 | 44 | 95 | 18 |
S8 | MPKRKVSSAEGAAKE | 10 | 1080 | 113 | - | 42 | 40 | 75 | 86 | 80 | - | 28 | 17 | 98 | 89 | 86 | 75 | 56 | 12 | 92 | 40 | 38 | 13 |
S21 | KEEPKRRSARLSAKP | 6 | 165 | - | - | 4 | 4 | - | - | 18 | - | - | - | 35 | 32 | 23 | 20 | - | - | 10 | 2 | 15 | 2 |
S25 | KRRSARLSAKPPAKV | 7 | 1021 | - | - | 94 | 72 | - | - | 99 | - | 79 | 45 | 103 | 94 | 101 | 93 | - | - | 94 | 39 | 90 | 18 |
T81 | LPAENGETKTEESPA | 7 | 160 | - | - | 8 | - | - | - | 9 | - | 15 | 9 | 10 | 9 | 34 | 31 | - | - | 10 | 4 | 17 | 4 |
T83 | AENGETKTEESPASD | 6 | 147 | - | - | 4 | 3 | - | - | - | - | 6 | 3 | 54 | 47 | 5 | 4 | - | - | 9 | 3 | 7 | 2 |
S86 | GETKTEESPASDEAG | 7 | 1036 | - | - | 89 | 68 | - | - | 90 | - | 95 | 56 | 103 | 95 | 93 | 85 | - | - | 105 | 44 | 95 | 18 |
S89 | KTEESPASDEAGEKE | 7 | 1034 | - | - | 95 | 72 | - | - | 99 | - | 95 | 57 | 108 | 99 | 110 | 101 | - | - | 81 | 33 | 66 | 18 |
S99 | AGEKEAKSD______ | 1 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5 | 4 | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S7 | _MPKRKVSSAEGAAK | -2.5e-32 | - | 0.94 | 0.62 | - | -3.5e-4 | -3.7e-24 | -2e-10 | -3.9e-3 | -1e-11 | -1.9e-5 |
S8 | MPKRKVSSAEGAAKE | -0.65 | - | -0.95 | 1.4e-7 | - | 0.84 | 0.52 | 3.2e-3 | 0.35 | -2.1e-9 | -1.9e-7 |
S21 | KEEPKRRSARLSAKP | -0.95 | - | - | - | - | - | 0.36 | -0.32 | - | - | - |
S25 | KRRSARLSAKPPAKV | -0.26 | - | 0.55 | - | - | -3.9e-3 | -7.2e-3 | 3.7e-6 | - | -0.88 | -0.024 |
T81 | LPAENGETKTEESPA | -0.018 | - | - | - | - | - | - | -0.018 | - | - | - |
T83 | AENGETKTEESPASD | -0.027 | - | - | - | - | - | -0.027 | - | - | - | - |
S86 | GETKTEESPASDEAG | 2.4e-3 | - | -7.5e-7 | - | - | -0.15 | 5.7e-19 | 5.6e-22 | - | -0.077 | -0.42 |
S89 | KTEESPASDEAGEKE | -2.0e-5 | - | -1.8e-18 | - | - | -0.33 | -0.23 | 1.5e-13 | - | -1.6e-13 | 0.63 |
S99 | AGEKEAKSD______ | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |